Protein–RNA interactions for Protein: Q505G4

Rtl6, Retrotransposon Gag-like protein 6, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl6Q505G4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtl6Q505G4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.19■■□□□ 1.14
Rtl6Q505G4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Rtl6Q505G4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.18■■□□□ 1.14
Rtl6Q505G4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtl6Q505G4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rtl6Q505G4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
Rtl6Q505G4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl6Q505G4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl6Q505G4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl6Q505G4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl6Q505G4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rtl6Q505G4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rtl6Q505G4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rtl6Q505G4 Peli2-204ENSMUST00000226513 1320 ntBASIC22.09■■□□□ 1.13
Rtl6Q505G4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rtl6Q505G4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Rtl6Q505G4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Rtl6Q505G4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rtl6Q505G4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.05■■□□□ 1.12
Rtl6Q505G4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rtl6Q505G4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.03■■□□□ 1.12
Rtl6Q505G4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Rtl6Q505G4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rtl6Q505G4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Rtl6Q505G4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Rtl6Q505G4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtl6Q505G4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtl6Q505G4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Rtl6Q505G4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rtl6Q505G4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Rtl6Q505G4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.98■■□□□ 1.11
Rtl6Q505G4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Rtl6Q505G4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Rtl6Q505G4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rtl6Q505G4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rtl6Q505G4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rtl6Q505G4 Gm16148-201ENSMUST00000119653 893 ntBASIC21.91■■□□□ 1.1
Rtl6Q505G4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rtl6Q505G4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rtl6Q505G4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rtl6Q505G4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rtl6Q505G4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtl6Q505G4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtl6Q505G4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rtl6Q505G4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtl6Q505G4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Rtl6Q505G4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtl6Q505G4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtl6Q505G4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtl6Q505G4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rtl6Q505G4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtl6Q505G4 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.84■■□□□ 1.09
Rtl6Q505G4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Rtl6Q505G4 Zfp131-205ENSMUST00000223812 663 ntBASIC21.83■■□□□ 1.09
Rtl6Q505G4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.83■■□□□ 1.08
Rtl6Q505G4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rtl6Q505G4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rtl6Q505G4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtl6Q505G4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtl6Q505G4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtl6Q505G4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtl6Q505G4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Rtl6Q505G4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.77■■□□□ 1.08
Rtl6Q505G4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.76■■□□□ 1.07
Rtl6Q505G4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtl6Q505G4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Rtl6Q505G4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtl6Q505G4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.72■■□□□ 1.07
Rtl6Q505G4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rtl6Q505G4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.69■■□□□ 1.06
Rtl6Q505G4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtl6Q505G4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.69■■□□□ 1.06
Rtl6Q505G4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtl6Q505G4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtl6Q505G4 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.66■■□□□ 1.06
Rtl6Q505G4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtl6Q505G4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtl6Q505G4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtl6Q505G4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtl6Q505G4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Rtl6Q505G4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rtl6Q505G4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.63■■□□□ 1.05
Rtl6Q505G4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtl6Q505G4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.62■■□□□ 1.05
Rtl6Q505G4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rtl6Q505G4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.61■■□□□ 1.05
Rtl6Q505G4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtl6Q505G4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Rtl6Q505G4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Rtl6Q505G4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtl6Q505G4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.6■■□□□ 1.05
Rtl6Q505G4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtl6Q505G4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Rtl6Q505G4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtl6Q505G4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Rtl6Q505G4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rtl6Q505G4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.55■■□□□ 1.04
Rtl6Q505G4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtl6Q505G4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms