Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30,88■■■□□ 2,53
Rc3h1Q4VGL6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30,86■■■□□ 2,53
Rc3h1Q4VGL6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30,85■■■□□ 2,53
Rc3h1Q4VGL6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30,84■■■□□ 2,53
Rc3h1Q4VGL6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30,84■■■□□ 2,53
Rc3h1Q4VGL6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30,83■■■□□ 2,53
Rc3h1Q4VGL6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30,83■■■□□ 2,53
Rc3h1Q4VGL6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30,83■■■□□ 2,53
Rc3h1Q4VGL6 Zfp131-205ENSMUST00000223812 663 ntBASIC30,83■■■□□ 2,53
Rc3h1Q4VGL6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30,83■■■□□ 2,53
Rc3h1Q4VGL6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30,81■■■□□ 2,52
Rc3h1Q4VGL6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30,78■■■□□ 2,52
Rc3h1Q4VGL6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30,78■■■□□ 2,52
Rc3h1Q4VGL6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30,77■■■□□ 2,52
Rc3h1Q4VGL6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30,74■■■□□ 2,51
Rc3h1Q4VGL6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30,74■■■□□ 2,51
Rc3h1Q4VGL6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30,74■■■□□ 2,51
Rc3h1Q4VGL6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Rc3h1Q4VGL6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Rc3h1Q4VGL6 Gm16148-201ENSMUST00000119653 893 ntBASIC30,73■■■□□ 2,51
Rc3h1Q4VGL6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30,72■■■□□ 2,51
Rc3h1Q4VGL6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30,71■■■□□ 2,51
Rc3h1Q4VGL6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30,71■■■□□ 2,51
Rc3h1Q4VGL6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30,7■■■□□ 2,5
Rc3h1Q4VGL6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30,69■■■□□ 2,5
Rc3h1Q4VGL6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30,68■■■□□ 2,5
Rc3h1Q4VGL6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30,65■■■□□ 2,5
Rc3h1Q4VGL6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30,65■■■□□ 2,5
Rc3h1Q4VGL6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30,64■■■□□ 2,5
Rc3h1Q4VGL6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30,64■■■□□ 2,5
Rc3h1Q4VGL6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30,63■■■□□ 2,49
Rc3h1Q4VGL6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30,62■■■□□ 2,49
Rc3h1Q4VGL6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30,59■■■□□ 2,49
Rc3h1Q4VGL6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30,57■■■□□ 2,48
Rc3h1Q4VGL6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30,56■■■□□ 2,48
Rc3h1Q4VGL6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30,54■■■□□ 2,48
Rc3h1Q4VGL6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30,53■■■□□ 2,48
Rc3h1Q4VGL6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30,53■■■□□ 2,48
Rc3h1Q4VGL6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30,52■■■□□ 2,48
Rc3h1Q4VGL6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30,51■■■□□ 2,47
Rc3h1Q4VGL6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30,51■■■□□ 2,47
Rc3h1Q4VGL6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Rc3h1Q4VGL6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30,45■■■□□ 2,47
Rc3h1Q4VGL6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30,44■■■□□ 2,46
Rc3h1Q4VGL6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30,43■■■□□ 2,46
Rc3h1Q4VGL6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Rc3h1Q4VGL6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30,4■■■□□ 2,46
Rc3h1Q4VGL6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30,38■■■□□ 2,45
Rc3h1Q4VGL6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30,38■■■□□ 2,45
Rc3h1Q4VGL6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30,36■■■□□ 2,45
Rc3h1Q4VGL6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30,35■■■□□ 2,45
Rc3h1Q4VGL6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30,35■■■□□ 2,45
Rc3h1Q4VGL6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30,34■■■□□ 2,45
Rc3h1Q4VGL6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30,32■■■□□ 2,44
Rc3h1Q4VGL6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30,32■■■□□ 2,44
Rc3h1Q4VGL6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30,3■■■□□ 2,44
Rc3h1Q4VGL6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30,3■■■□□ 2,44
Rc3h1Q4VGL6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30,27■■■□□ 2,44
Rc3h1Q4VGL6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30,27■■■□□ 2,44
Rc3h1Q4VGL6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30,26■■■□□ 2,43
Rc3h1Q4VGL6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30,25■■■□□ 2,43
Rc3h1Q4VGL6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30,24■■■□□ 2,43
Rc3h1Q4VGL6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30,22■■■□□ 2,43
Rc3h1Q4VGL6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30,2■■■□□ 2,42
Rc3h1Q4VGL6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30,19■■■□□ 2,42
Rc3h1Q4VGL6 Tdp2-203ENSMUST00000223804 1136 ntBASIC30,18■■■□□ 2,42
Rc3h1Q4VGL6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30,18■■■□□ 2,42
Rc3h1Q4VGL6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30,16■■■□□ 2,42
Rc3h1Q4VGL6 Gm2415-204ENSMUST00000190235 2004 ntBASIC30,15■■■□□ 2,42
Rc3h1Q4VGL6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30,15■■■□□ 2,42
Rc3h1Q4VGL6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30,12■■■□□ 2,41
Rc3h1Q4VGL6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Rc3h1Q4VGL6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30,11■■■□□ 2,41
Rc3h1Q4VGL6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30,11■■■□□ 2,41
Rc3h1Q4VGL6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30,11■■■□□ 2,41
Rc3h1Q4VGL6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30,1■■■□□ 2,41
Rc3h1Q4VGL6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30,1■■■□□ 2,41
Rc3h1Q4VGL6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30,08■■■□□ 2,41
Rc3h1Q4VGL6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30,08■■■□□ 2,41
Rc3h1Q4VGL6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30,07■■■□□ 2,4
Rc3h1Q4VGL6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30,07■■■□□ 2,4
Rc3h1Q4VGL6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30,07■■■□□ 2,4
Rc3h1Q4VGL6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30,07■■■□□ 2,4
Rc3h1Q4VGL6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30,07■■■□□ 2,4
Rc3h1Q4VGL6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30,05■■■□□ 2,4
Rc3h1Q4VGL6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30,05■■■□□ 2,4
Rc3h1Q4VGL6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Rc3h1Q4VGL6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Rc3h1Q4VGL6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29,99■■■□□ 2,39
Rc3h1Q4VGL6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29,98■■■□□ 2,39
Rc3h1Q4VGL6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29,97■■■□□ 2,39
Rc3h1Q4VGL6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29,96■■■□□ 2,39
Rc3h1Q4VGL6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29,96■■■□□ 2,39
Rc3h1Q4VGL6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Rc3h1Q4VGL6 Gm45855-201ENSMUST00000212546 880 ntBASIC29,95■■■□□ 2,39
Rc3h1Q4VGL6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29,95■■■□□ 2,38
Rc3h1Q4VGL6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
Rc3h1Q4VGL6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
Rc3h1Q4VGL6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
Rc3h1Q4VGL6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29,92■■■□□ 2,38
Retrieved 100 of 76,532 protein–RNA pairs in 10,8 ms