Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Fndc4Q3TR08 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Fndc4Q3TR08 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.84■■□□□ 1.09
Fndc4Q3TR08 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Fndc4Q3TR08 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Fndc4Q3TR08 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Fndc4Q3TR08 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Fndc4Q3TR08 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Fndc4Q3TR08 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Fndc4Q3TR08 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Fndc4Q3TR08 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Fndc4Q3TR08 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Fndc4Q3TR08 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Fndc4Q3TR08 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Fndc4Q3TR08 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Fndc4Q3TR08 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Fndc4Q3TR08 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Fndc4Q3TR08 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fndc4Q3TR08 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.73■■□□□ 1.07
Fndc4Q3TR08 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Fndc4Q3TR08 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Fndc4Q3TR08 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Fndc4Q3TR08 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.7■■□□□ 1.06
Fndc4Q3TR08 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Fndc4Q3TR08 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Fndc4Q3TR08 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.68■■□□□ 1.06
Fndc4Q3TR08 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Fndc4Q3TR08 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Fndc4Q3TR08 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.67■■□□□ 1.06
Fndc4Q3TR08 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.67■■□□□ 1.06
Fndc4Q3TR08 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Fndc4Q3TR08 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fndc4Q3TR08 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.66■■□□□ 1.06
Fndc4Q3TR08 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Fndc4Q3TR08 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Fndc4Q3TR08 Gm26115-201ENSMUST00000175605 87 ntBASIC21.65■■□□□ 1.06
Fndc4Q3TR08 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Fndc4Q3TR08 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Fndc4Q3TR08 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Fndc4Q3TR08 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Fndc4Q3TR08 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.6■■□□□ 1.05
Fndc4Q3TR08 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Fndc4Q3TR08 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Fndc4Q3TR08 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Fndc4Q3TR08 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Fndc4Q3TR08 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Fndc4Q3TR08 Gm27322-201ENSMUST00000184007 104 ntBASIC21.58■■□□□ 1.05
Fndc4Q3TR08 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Fndc4Q3TR08 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fndc4Q3TR08 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Fndc4Q3TR08 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Fndc4Q3TR08 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.55■■□□□ 1.04
Fndc4Q3TR08 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fndc4Q3TR08 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fndc4Q3TR08 Gm8109-201ENSMUST00000194076 746 ntBASIC21.55■■□□□ 1.04
Fndc4Q3TR08 Mipep-204ENSMUST00000225043 1548 ntBASIC21.55■■□□□ 1.04
Fndc4Q3TR08 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fndc4Q3TR08 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
Fndc4Q3TR08 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fndc4Q3TR08 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fndc4Q3TR08 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fndc4Q3TR08 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Fndc4Q3TR08 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
Fndc4Q3TR08 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fndc4Q3TR08 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fndc4Q3TR08 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Fndc4Q3TR08 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fndc4Q3TR08 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.43■■□□□ 1.02
Fndc4Q3TR08 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.42■■□□□ 1.02
Fndc4Q3TR08 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
Fndc4Q3TR08 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fndc4Q3TR08 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.4■■□□□ 1.02
Fndc4Q3TR08 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fndc4Q3TR08 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Fndc4Q3TR08 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Fndc4Q3TR08 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.38■■□□□ 1.01
Fndc4Q3TR08 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fndc4Q3TR08 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Fndc4Q3TR08 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Fndc4Q3TR08 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fndc4Q3TR08 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fndc4Q3TR08 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fndc4Q3TR08 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fndc4Q3TR08 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fndc4Q3TR08 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Fndc4Q3TR08 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fndc4Q3TR08 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Fndc4Q3TR08 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Fndc4Q3TR08 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Fndc4Q3TR08 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Fndc4Q3TR08 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fndc4Q3TR08 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.3■■□□□ 1
Fndc4Q3TR08 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fndc4Q3TR08 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fndc4Q3TR08 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Fndc4Q3TR08 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Fndc4Q3TR08 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.24■□□□□ 0.99
Fndc4Q3TR08 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fndc4Q3TR08 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Fndc4Q3TR08 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms