Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Cpne2P59108 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cpne2P59108 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.47■■□□□ 1.03
Cpne2P59108 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cpne2P59108 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cpne2P59108 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cpne2P59108 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cpne2P59108 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpne2P59108 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpne2P59108 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.39■■□□□ 1.02
Cpne2P59108 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpne2P59108 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne2P59108 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne2P59108 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne2P59108 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne2P59108 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne2P59108 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cpne2P59108 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cpne2P59108 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cpne2P59108 Gm25262-201ENSMUST00000174934 133 ntBASIC21.33■■□□□ 1.01
Cpne2P59108 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cpne2P59108 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cpne2P59108 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cpne2P59108 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cpne2P59108 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.3■■□□□ 1
Cpne2P59108 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cpne2P59108 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cpne2P59108 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cpne2P59108 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpne2P59108 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpne2P59108 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cpne2P59108 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpne2P59108 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpne2P59108 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cpne2P59108 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.22■□□□□ 0.99
Cpne2P59108 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cpne2P59108 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpne2P59108 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpne2P59108 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpne2P59108 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cpne2P59108 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.18■□□□□ 0.98
Cpne2P59108 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpne2P59108 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpne2P59108 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpne2P59108 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.14■□□□□ 0.97
Cpne2P59108 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpne2P59108 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpne2P59108 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cpne2P59108 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cpne2P59108 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpne2P59108 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpne2P59108 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.11■□□□□ 0.97
Cpne2P59108 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpne2P59108 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpne2P59108 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpne2P59108 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
Cpne2P59108 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpne2P59108 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.09■□□□□ 0.97
Cpne2P59108 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cpne2P59108 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpne2P59108 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne2P59108 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cpne2P59108 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne2P59108 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne2P59108 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne2P59108 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne2P59108 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Cpne2P59108 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cpne2P59108 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cpne2P59108 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne2P59108 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne2P59108 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.99■□□□□ 0.95
Cpne2P59108 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne2P59108 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne2P59108 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne2P59108 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne2P59108 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne2P59108 Mipep-204ENSMUST00000225043 1548 ntBASIC20.96■□□□□ 0.95
Cpne2P59108 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne2P59108 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne2P59108 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne2P59108 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cpne2P59108 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne2P59108 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cpne2P59108 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
Cpne2P59108 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne2P59108 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne2P59108 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.92■□□□□ 0.94
Cpne2P59108 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpne2P59108 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpne2P59108 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cpne2P59108 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne2P59108 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.9■□□□□ 0.94
Cpne2P59108 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpne2P59108 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Cpne2P59108 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpne2P59108 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cpne2P59108 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpne2P59108 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.87■□□□□ 0.93
Cpne2P59108 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms