Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22,55■■□□□ 1,2
GdnfP48540 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22,52■■□□□ 1,2
GdnfP48540 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22,51■■□□□ 1,19
GdnfP48540 Gm9905-201ENSMUST00000065740 1845 ntBASIC22,51■■□□□ 1,19
GdnfP48540 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22,5■■□□□ 1,19
GdnfP48540 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22,48■■□□□ 1,19
GdnfP48540 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22,46■■□□□ 1,19
GdnfP48540 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22,46■■□□□ 1,19
GdnfP48540 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22,46■■□□□ 1,19
GdnfP48540 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22,45■■□□□ 1,18
GdnfP48540 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22,45■■□□□ 1,18
GdnfP48540 Gm6206-201ENSMUST00000133472 2199 ntBASIC22,45■■□□□ 1,18
GdnfP48540 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22,43■■□□□ 1,18
GdnfP48540 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22,43■■□□□ 1,18
GdnfP48540 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22,43■■□□□ 1,18
GdnfP48540 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22,42■■□□□ 1,18
GdnfP48540 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22,42■■□□□ 1,18
GdnfP48540 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22,41■■□□□ 1,18
GdnfP48540 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22,41■■□□□ 1,18
GdnfP48540 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22,37■■□□□ 1,17
GdnfP48540 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22,37■■□□□ 1,17
GdnfP48540 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22,36■■□□□ 1,17
GdnfP48540 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22,36■■□□□ 1,17
GdnfP48540 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
GdnfP48540 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22,35■■□□□ 1,17
GdnfP48540 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
GdnfP48540 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22,35■■□□□ 1,17
GdnfP48540 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22,34■■□□□ 1,17
GdnfP48540 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22,33■■□□□ 1,17
GdnfP48540 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22,33■■□□□ 1,16
GdnfP48540 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22,32■■□□□ 1,16
GdnfP48540 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22,31■■□□□ 1,16
GdnfP48540 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22,3■■□□□ 1,16
GdnfP48540 Gm17082-201ENSMUST00000166043 1091 ntBASIC22,3■■□□□ 1,16
GdnfP48540 AL845457.1-201ENSMUST00000197244 68 ntBASIC22,3■■□□□ 1,16
GdnfP48540 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22,26■■□□□ 1,15
GdnfP48540 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22,26■■□□□ 1,15
GdnfP48540 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22,26■■□□□ 1,15
GdnfP48540 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22,25■■□□□ 1,15
GdnfP48540 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22,25■■□□□ 1,15
GdnfP48540 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22,25■■□□□ 1,15
GdnfP48540 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22,24■■□□□ 1,15
GdnfP48540 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22,24■■□□□ 1,15
GdnfP48540 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22,24■■□□□ 1,15
GdnfP48540 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22,23■■□□□ 1,15
GdnfP48540 Gm26115-201ENSMUST00000175605 87 ntBASIC22,23■■□□□ 1,15
GdnfP48540 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22,23■■□□□ 1,15
GdnfP48540 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22,23■■□□□ 1,15
GdnfP48540 Gm8109-201ENSMUST00000194076 746 ntBASIC22,22■■□□□ 1,15
GdnfP48540 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22,22■■□□□ 1,15
GdnfP48540 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22,21■■□□□ 1,15
GdnfP48540 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22,21■■□□□ 1,15
GdnfP48540 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22,21■■□□□ 1,15
GdnfP48540 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22,2■■□□□ 1,14
GdnfP48540 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22,2■■□□□ 1,14
GdnfP48540 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22,19■■□□□ 1,14
GdnfP48540 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22,18■■□□□ 1,14
GdnfP48540 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22,17■■□□□ 1,14
GdnfP48540 Gm27322-201ENSMUST00000184007 104 ntBASIC22,17■■□□□ 1,14
GdnfP48540 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22,16■■□□□ 1,14
GdnfP48540 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22,16■■□□□ 1,14
GdnfP48540 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22,15■■□□□ 1,14
GdnfP48540 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22,15■■□□□ 1,14
GdnfP48540 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22,15■■□□□ 1,14
GdnfP48540 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22,14■■□□□ 1,13
GdnfP48540 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22,13■■□□□ 1,13
GdnfP48540 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22,12■■□□□ 1,13
GdnfP48540 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22,12■■□□□ 1,13
GdnfP48540 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22,11■■□□□ 1,13
GdnfP48540 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22,1■■□□□ 1,13
GdnfP48540 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22,1■■□□□ 1,13
GdnfP48540 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22,1■■□□□ 1,13
GdnfP48540 Gm43445-201ENSMUST00000198564 2091 ntBASIC22,1■■□□□ 1,13
GdnfP48540 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22,09■■□□□ 1,13
GdnfP48540 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22,09■■□□□ 1,13
GdnfP48540 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22,08■■□□□ 1,13
GdnfP48540 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
GdnfP48540 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
GdnfP48540 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22,05■■□□□ 1,12
GdnfP48540 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22,05■■□□□ 1,12
GdnfP48540 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22,03■■□□□ 1,12
GdnfP48540 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22,03■■□□□ 1,12
GdnfP48540 Mipep-204ENSMUST00000225043 1548 ntBASIC22,02■■□□□ 1,12
GdnfP48540 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22■■□□□ 1,11
GdnfP48540 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1,11
GdnfP48540 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21,98■■□□□ 1,11
GdnfP48540 AC166822.3-201ENSMUST00000227394 661 ntBASIC21,97■■□□□ 1,11
GdnfP48540 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21,97■■□□□ 1,11
GdnfP48540 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21,96■■□□□ 1,11
GdnfP48540 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21,95■■□□□ 1,1
GdnfP48540 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21,95■■□□□ 1,1
GdnfP48540 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21,94■■□□□ 1,1
GdnfP48540 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21,94■■□□□ 1,1
GdnfP48540 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21,94■■□□□ 1,1
GdnfP48540 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21,94■■□□□ 1,1
GdnfP48540 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21,94■■□□□ 1,1
GdnfP48540 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21,93■■□□□ 1,1
GdnfP48540 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21,93■■□□□ 1,1
GdnfP48540 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21,93■■□□□ 1,1
GdnfP48540 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21,92■■□□□ 1,1
Retrieved 100 of 76,532 protein–RNA pairs in 11,7 ms