Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Hcn1O88704 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Hcn1O88704 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hcn1O88704 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hcn1O88704 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Hcn1O88704 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Hcn1O88704 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Hcn1O88704 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.62■■□□□ 1.53
Hcn1O88704 Zxda-201ENSMUST00000117281 2621 ntBASIC24.6■■□□□ 1.53
Hcn1O88704 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.6■■□□□ 1.53
Hcn1O88704 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Hcn1O88704 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Hcn1O88704 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Hcn1O88704 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Hcn1O88704 Gm24804-201ENSMUST00000174982 85 ntBASIC24.56■■□□□ 1.52
Hcn1O88704 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Hcn1O88704 Mipep-204ENSMUST00000225043 1548 ntBASIC24.53■■□□□ 1.52
Hcn1O88704 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Hcn1O88704 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hcn1O88704 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hcn1O88704 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hcn1O88704 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Hcn1O88704 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Hcn1O88704 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.45■■□□□ 1.5
Hcn1O88704 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Hcn1O88704 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Hcn1O88704 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Hcn1O88704 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Hcn1O88704 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Hcn1O88704 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Hcn1O88704 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Hcn1O88704 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Hcn1O88704 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.39■■□□□ 1.5
Hcn1O88704 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Hcn1O88704 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hcn1O88704 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Hcn1O88704 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Hcn1O88704 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.3■■□□□ 1.48
Hcn1O88704 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Hcn1O88704 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.27■■□□□ 1.48
Hcn1O88704 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Hcn1O88704 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Hcn1O88704 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Hcn1O88704 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Hcn1O88704 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Hcn1O88704 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Hcn1O88704 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Hcn1O88704 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.24■■□□□ 1.47
Hcn1O88704 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Hcn1O88704 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Hcn1O88704 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Hcn1O88704 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Hcn1O88704 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Hcn1O88704 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.21■■□□□ 1.47
Hcn1O88704 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Hcn1O88704 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Hcn1O88704 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Hcn1O88704 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Hcn1O88704 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Hcn1O88704 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.19■■□□□ 1.46
Hcn1O88704 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Hcn1O88704 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Hcn1O88704 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Hcn1O88704 Peli2-204ENSMUST00000226513 1320 ntBASIC24.18■■□□□ 1.46
Hcn1O88704 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hcn1O88704 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.17■■□□□ 1.46
Hcn1O88704 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Hcn1O88704 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Hcn1O88704 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Hcn1O88704 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hcn1O88704 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.13■■□□□ 1.45
Hcn1O88704 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Hcn1O88704 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Hcn1O88704 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hcn1O88704 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Hcn1O88704 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Hcn1O88704 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Hcn1O88704 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Hcn1O88704 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Hcn1O88704 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.1■■□□□ 1.45
Hcn1O88704 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Hcn1O88704 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Hcn1O88704 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Hcn1O88704 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Hcn1O88704 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Hcn1O88704 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Hcn1O88704 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.03■■□□□ 1.44
Hcn1O88704 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Hcn1O88704 Gm16148-201ENSMUST00000119653 893 ntBASIC24.01■■□□□ 1.43
Hcn1O88704 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24■■□□□ 1.43
Hcn1O88704 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Hcn1O88704 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Hcn1O88704 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Hcn1O88704 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Hcn1O88704 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hcn1O88704 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hcn1O88704 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hcn1O88704 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hcn1O88704 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
Hcn1O88704 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms