Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.37■■■□□ 2.61
Slc4a4O88343 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Slc4a4O88343 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Slc4a4O88343 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Slc4a4O88343 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Slc4a4O88343 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Slc4a4O88343 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Slc4a4O88343 Peli2-204ENSMUST00000226513 1320 ntBASIC31.27■■■□□ 2.6
Slc4a4O88343 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Slc4a4O88343 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Slc4a4O88343 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Slc4a4O88343 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Slc4a4O88343 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.23■■■□□ 2.59
Slc4a4O88343 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Slc4a4O88343 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Slc4a4O88343 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
Slc4a4O88343 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
Slc4a4O88343 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Slc4a4O88343 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
Slc4a4O88343 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Slc4a4O88343 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Slc4a4O88343 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Slc4a4O88343 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Slc4a4O88343 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.14■■■□□ 2.58
Slc4a4O88343 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
Slc4a4O88343 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.09■■■□□ 2.57
Slc4a4O88343 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
Slc4a4O88343 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Slc4a4O88343 Gm16148-201ENSMUST00000119653 893 ntBASIC31.05■■■□□ 2.56
Slc4a4O88343 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Slc4a4O88343 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Slc4a4O88343 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31■■■□□ 2.55
Slc4a4O88343 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Slc4a4O88343 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Slc4a4O88343 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Slc4a4O88343 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Slc4a4O88343 Zfp131-205ENSMUST00000223812 663 ntBASIC30.92■■■□□ 2.54
Slc4a4O88343 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
Slc4a4O88343 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Slc4a4O88343 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Slc4a4O88343 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Slc4a4O88343 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Slc4a4O88343 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.88■■■□□ 2.53
Slc4a4O88343 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Slc4a4O88343 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Slc4a4O88343 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Slc4a4O88343 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Slc4a4O88343 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.83■■■□□ 2.53
Slc4a4O88343 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Slc4a4O88343 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.81■■■□□ 2.52
Slc4a4O88343 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Slc4a4O88343 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Slc4a4O88343 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Slc4a4O88343 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Slc4a4O88343 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Slc4a4O88343 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.75■■■□□ 2.51
Slc4a4O88343 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Slc4a4O88343 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Slc4a4O88343 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Slc4a4O88343 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.73■■■□□ 2.51
Slc4a4O88343 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.71■■■□□ 2.51
Slc4a4O88343 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Slc4a4O88343 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Slc4a4O88343 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Slc4a4O88343 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Slc4a4O88343 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Slc4a4O88343 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Slc4a4O88343 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Slc4a4O88343 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Slc4a4O88343 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Slc4a4O88343 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.61■■■□□ 2.49
Slc4a4O88343 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.6■■■□□ 2.49
Slc4a4O88343 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
Slc4a4O88343 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.6■■■□□ 2.49
Slc4a4O88343 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.59■■■□□ 2.49
Slc4a4O88343 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.58■■■□□ 2.49
Slc4a4O88343 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.57■■■□□ 2.48
Slc4a4O88343 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Slc4a4O88343 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Slc4a4O88343 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Slc4a4O88343 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.56■■■□□ 2.48
Slc4a4O88343 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
Slc4a4O88343 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.55■■■□□ 2.48
Slc4a4O88343 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Slc4a4O88343 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Slc4a4O88343 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Slc4a4O88343 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.48■■■□□ 2.47
Slc4a4O88343 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.48■■■□□ 2.47
Slc4a4O88343 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
Slc4a4O88343 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Slc4a4O88343 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Slc4a4O88343 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
Slc4a4O88343 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Slc4a4O88343 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
Slc4a4O88343 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
Slc4a4O88343 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.41■■■□□ 2.46
Slc4a4O88343 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Slc4a4O88343 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Slc4a4O88343 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Slc4a4O88343 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms