Protein–RNA interactions for Protein: O88255

Gm10509, Mszf57 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10509O88255 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm10509O88255 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm10509O88255 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm10509O88255 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm10509O88255 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm10509O88255 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.64■□□□□ 0.57
Gm10509O88255 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gm10509O88255 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm10509O88255 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm10509O88255 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm10509O88255 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm10509O88255 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Gm10509O88255 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm10509O88255 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm10509O88255 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Gm10509O88255 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm10509O88255 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.58■□□□□ 0.56
Gm10509O88255 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm10509O88255 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Gm10509O88255 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm10509O88255 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.56■□□□□ 0.56
Gm10509O88255 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm10509O88255 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm10509O88255 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm10509O88255 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm10509O88255 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.51■□□□□ 0.55
Gm10509O88255 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm10509O88255 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.49■□□□□ 0.55
Gm10509O88255 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Gm10509O88255 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm10509O88255 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.48■□□□□ 0.55
Gm10509O88255 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm10509O88255 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm10509O88255 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm10509O88255 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Gm10509O88255 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm10509O88255 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm10509O88255 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.45■□□□□ 0.54
Gm10509O88255 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm10509O88255 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm10509O88255 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.44■□□□□ 0.54
Gm10509O88255 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm10509O88255 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Gm10509O88255 Gm27322-201ENSMUST00000184007 104 ntBASIC18.42■□□□□ 0.54
Gm10509O88255 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm10509O88255 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm10509O88255 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm10509O88255 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Gm10509O88255 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm10509O88255 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm10509O88255 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm10509O88255 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Gm10509O88255 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm10509O88255 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm10509O88255 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm10509O88255 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm10509O88255 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm10509O88255 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm10509O88255 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Gm10509O88255 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Gm10509O88255 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm10509O88255 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm10509O88255 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm10509O88255 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm10509O88255 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm10509O88255 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gm10509O88255 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.31■□□□□ 0.52
Gm10509O88255 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm10509O88255 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm10509O88255 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gm10509O88255 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.3■□□□□ 0.52
Gm10509O88255 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm10509O88255 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm10509O88255 Zxda-201ENSMUST00000117281 2621 ntBASIC18.28■□□□□ 0.52
Gm10509O88255 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm10509O88255 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
Gm10509O88255 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm10509O88255 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm10509O88255 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.24■□□□□ 0.51
Gm10509O88255 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Gm10509O88255 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm10509O88255 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm10509O88255 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm10509O88255 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Gm10509O88255 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm10509O88255 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm10509O88255 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm10509O88255 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Gm10509O88255 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm10509O88255 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.17■□□□□ 0.5
Gm10509O88255 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm10509O88255 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.16■□□□□ 0.5
Gm10509O88255 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm10509O88255 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm10509O88255 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm10509O88255 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.15■□□□□ 0.5
Gm10509O88255 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm10509O88255 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Gm10509O88255 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Gm10509O88255 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms