Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Gm10139O88245 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Gm10139O88245 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Gm10139O88245 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm10139O88245 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm10139O88245 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC15.98■□□□□ 0.15
Gm10139O88245 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm10139O88245 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Gm10139O88245 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Gm10139O88245 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm10139O88245 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Gm10139O88245 Gm25262-201ENSMUST00000174934 133 ntBASIC15.94■□□□□ 0.14
Gm10139O88245 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm10139O88245 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm10139O88245 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm10139O88245 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm10139O88245 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm10139O88245 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm10139O88245 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm10139O88245 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm10139O88245 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Gm10139O88245 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm10139O88245 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm10139O88245 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC15.84■□□□□ 0.13
Gm10139O88245 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Gm10139O88245 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gm10139O88245 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm10139O88245 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm10139O88245 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm10139O88245 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm10139O88245 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Gm10139O88245 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm10139O88245 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Gm10139O88245 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm10139O88245 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm10139O88245 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm10139O88245 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm10139O88245 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC15.79■□□□□ 0.12
Gm10139O88245 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC15.79■□□□□ 0.12
Gm10139O88245 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm10139O88245 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm10139O88245 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10139O88245 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10139O88245 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC15.77■□□□□ 0.12
Gm10139O88245 Gm9905-201ENSMUST00000065740 1845 ntBASIC15.76■□□□□ 0.11
Gm10139O88245 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm10139O88245 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gm10139O88245 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Gm10139O88245 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm10139O88245 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm10139O88245 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10139O88245 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Gm10139O88245 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm10139O88245 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm10139O88245 AC166822.3-201ENSMUST00000227394 661 ntBASIC15.72■□□□□ 0.11
Gm10139O88245 Gm17082-201ENSMUST00000166043 1091 ntBASIC15.71■□□□□ 0.11
Gm10139O88245 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Gm10139O88245 Zxda-201ENSMUST00000117281 2621 ntBASIC15.71■□□□□ 0.11
Gm10139O88245 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10139O88245 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC15.7■□□□□ 0.1
Gm10139O88245 Gm6206-201ENSMUST00000133472 2199 ntBASIC15.7■□□□□ 0.1
Gm10139O88245 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm10139O88245 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Gm10139O88245 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Gm10139O88245 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm10139O88245 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm10139O88245 Gm27322-201ENSMUST00000184007 104 ntBASIC15.66■□□□□ 0.1
Gm10139O88245 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
Gm10139O88245 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Gm10139O88245 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm10139O88245 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Gm10139O88245 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm10139O88245 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm10139O88245 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Gm10139O88245 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm10139O88245 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Gm10139O88245 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm10139O88245 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10139O88245 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm10139O88245 Gm43445-201ENSMUST00000198564 2091 ntBASIC15.61■□□□□ 0.09
Gm10139O88245 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm10139O88245 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm10139O88245 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm10139O88245 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Gm10139O88245 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Gm10139O88245 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Gm10139O88245 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm10139O88245 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC15.56■□□□□ 0.08
Gm10139O88245 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm10139O88245 Gm6345-201ENSMUST00000180378 1691 ntBASIC15.56■□□□□ 0.08
Gm10139O88245 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm10139O88245 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm10139O88245 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC15.54■□□□□ 0.08
Gm10139O88245 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC15.53■□□□□ 0.08
Gm10139O88245 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm10139O88245 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm10139O88245 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm10139O88245 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm10139O88245 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm10139O88245 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms