Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Gm8109-201ENSMUST00000194076 746 ntBASIC23.24■■□□□ 1.31
Raet1bO08603 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Raet1bO08603 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.24■■□□□ 1.31
Raet1bO08603 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Raet1bO08603 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Raet1bO08603 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Raet1bO08603 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Raet1bO08603 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Raet1bO08603 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Raet1bO08603 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Raet1bO08603 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Raet1bO08603 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Raet1bO08603 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Raet1bO08603 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Raet1bO08603 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Raet1bO08603 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Raet1bO08603 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Raet1bO08603 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Raet1bO08603 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Raet1bO08603 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Raet1bO08603 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Raet1bO08603 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Raet1bO08603 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Raet1bO08603 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Raet1bO08603 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Raet1bO08603 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23■■□□□ 1.27
Raet1bO08603 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Raet1bO08603 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
Raet1bO08603 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Raet1bO08603 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Raet1bO08603 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Raet1bO08603 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Raet1bO08603 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Raet1bO08603 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Raet1bO08603 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Raet1bO08603 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Raet1bO08603 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Raet1bO08603 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.89■■□□□ 1.26
Raet1bO08603 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Raet1bO08603 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Raet1bO08603 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Raet1bO08603 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Raet1bO08603 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Raet1bO08603 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Raet1bO08603 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Raet1bO08603 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.84■■□□□ 1.25
Raet1bO08603 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Raet1bO08603 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Raet1bO08603 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Raet1bO08603 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Raet1bO08603 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.81■■□□□ 1.24
Raet1bO08603 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Raet1bO08603 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Raet1bO08603 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.8■■□□□ 1.24
Raet1bO08603 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Raet1bO08603 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.78■■□□□ 1.24
Raet1bO08603 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Raet1bO08603 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.77■■□□□ 1.24
Raet1bO08603 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Raet1bO08603 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Raet1bO08603 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.76■■□□□ 1.23
Raet1bO08603 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Raet1bO08603 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Raet1bO08603 Peli2-204ENSMUST00000226513 1320 ntBASIC22.74■■□□□ 1.23
Raet1bO08603 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Raet1bO08603 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Raet1bO08603 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Raet1bO08603 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Raet1bO08603 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.71■■□□□ 1.23
Raet1bO08603 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Raet1bO08603 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Raet1bO08603 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Raet1bO08603 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Raet1bO08603 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.66■■□□□ 1.22
Raet1bO08603 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Raet1bO08603 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Raet1bO08603 Gm24804-201ENSMUST00000174982 85 ntBASIC22.64■■□□□ 1.21
Raet1bO08603 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Raet1bO08603 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Raet1bO08603 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
Raet1bO08603 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.62■■□□□ 1.21
Raet1bO08603 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Raet1bO08603 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Raet1bO08603 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Raet1bO08603 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Raet1bO08603 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Raet1bO08603 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.59■■□□□ 1.21
Raet1bO08603 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Raet1bO08603 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Raet1bO08603 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.57■■□□□ 1.2
Raet1bO08603 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Raet1bO08603 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Raet1bO08603 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Raet1bO08603 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
Raet1bO08603 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Raet1bO08603 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Raet1bO08603 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Raet1bO08603 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Raet1bO08603 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Raet1bO08603 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms