Protein–RNA interactions for Protein: A0A140T8U4

Rpl36-ps4, Ribosomal protein L36, pseudogene 4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl36-ps4A0A140T8U4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl36-ps4A0A140T8U4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl36-ps4A0A140T8U4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl36-ps4A0A140T8U4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl36-ps4A0A140T8U4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.65■□□□□ 0.58
Rpl36-ps4A0A140T8U4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rpl36-ps4A0A140T8U4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl36-ps4A0A140T8U4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl36-ps4A0A140T8U4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl36-ps4A0A140T8U4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl36-ps4A0A140T8U4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl36-ps4A0A140T8U4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl36-ps4A0A140T8U4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.58■□□□□ 0.56
Rpl36-ps4A0A140T8U4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rpl36-ps4A0A140T8U4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rpl36-ps4A0A140T8U4 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.57■□□□□ 0.56
Rpl36-ps4A0A140T8U4 Zxda-201ENSMUST00000117281 2621 ntBASIC18.55■□□□□ 0.56
Rpl36-ps4A0A140T8U4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpl36-ps4A0A140T8U4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rpl36-ps4A0A140T8U4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpl36-ps4A0A140T8U4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpl36-ps4A0A140T8U4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpl36-ps4A0A140T8U4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpl36-ps4A0A140T8U4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.51■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.51■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rpl36-ps4A0A140T8U4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.44■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpl36-ps4A0A140T8U4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.44■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Rpl36-ps4A0A140T8U4 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.39■□□□□ 0.53
Rpl36-ps4A0A140T8U4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpl36-ps4A0A140T8U4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpl36-ps4A0A140T8U4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpl36-ps4A0A140T8U4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpl36-ps4A0A140T8U4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpl36-ps4A0A140T8U4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpl36-ps4A0A140T8U4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl36-ps4A0A140T8U4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl36-ps4A0A140T8U4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rpl36-ps4A0A140T8U4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.35■□□□□ 0.53
Rpl36-ps4A0A140T8U4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl36-ps4A0A140T8U4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl36-ps4A0A140T8U4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl36-ps4A0A140T8U4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.3■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rpl36-ps4A0A140T8U4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.26■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.21■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.21■□□□□ 0.51
Rpl36-ps4A0A140T8U4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl36-ps4A0A140T8U4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl36-ps4A0A140T8U4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl36-ps4A0A140T8U4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms