Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav7-1A0A0G2JEV5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Trav7-1A0A0G2JEV5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav7-1A0A0G2JEV5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trav7-1A0A0G2JEV5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav7-1A0A0G2JEV5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav7-1A0A0G2JEV5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trav7-1A0A0G2JEV5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav7-1A0A0G2JEV5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav7-1A0A0G2JEV5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav7-1A0A0G2JEV5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav7-1A0A0G2JEV5 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.95■□□□□ 0.78
Trav7-1A0A0G2JEV5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav7-1A0A0G2JEV5 Mipep-204ENSMUST00000225043 1548 ntBASIC19.94■□□□□ 0.78
Trav7-1A0A0G2JEV5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav7-1A0A0G2JEV5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trav7-1A0A0G2JEV5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trav7-1A0A0G2JEV5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav7-1A0A0G2JEV5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trav7-1A0A0G2JEV5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.86■□□□□ 0.77
Trav7-1A0A0G2JEV5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav7-1A0A0G2JEV5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav7-1A0A0G2JEV5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav7-1A0A0G2JEV5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav7-1A0A0G2JEV5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav7-1A0A0G2JEV5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav7-1A0A0G2JEV5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav7-1A0A0G2JEV5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav7-1A0A0G2JEV5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav7-1A0A0G2JEV5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav7-1A0A0G2JEV5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav7-1A0A0G2JEV5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.79■□□□□ 0.76
Trav7-1A0A0G2JEV5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav7-1A0A0G2JEV5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav7-1A0A0G2JEV5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Trav7-1A0A0G2JEV5 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.76■□□□□ 0.75
Trav7-1A0A0G2JEV5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav7-1A0A0G2JEV5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav7-1A0A0G2JEV5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav7-1A0A0G2JEV5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav7-1A0A0G2JEV5 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.75■□□□□ 0.75
Trav7-1A0A0G2JEV5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav7-1A0A0G2JEV5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav7-1A0A0G2JEV5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav7-1A0A0G2JEV5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trav7-1A0A0G2JEV5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trav7-1A0A0G2JEV5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav7-1A0A0G2JEV5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav7-1A0A0G2JEV5 Zxda-201ENSMUST00000117281 2621 ntBASIC19.7■□□□□ 0.74
Trav7-1A0A0G2JEV5 Gm25262-201ENSMUST00000174934 133 ntBASIC19.69■□□□□ 0.74
Trav7-1A0A0G2JEV5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav7-1A0A0G2JEV5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trav7-1A0A0G2JEV5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav7-1A0A0G2JEV5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trav7-1A0A0G2JEV5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Trav7-1A0A0G2JEV5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.74
Trav7-1A0A0G2JEV5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav7-1A0A0G2JEV5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav7-1A0A0G2JEV5 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.6■□□□□ 0.73
Trav7-1A0A0G2JEV5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trav7-1A0A0G2JEV5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav7-1A0A0G2JEV5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Trav7-1A0A0G2JEV5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav7-1A0A0G2JEV5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav7-1A0A0G2JEV5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.57■□□□□ 0.72
Trav7-1A0A0G2JEV5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav7-1A0A0G2JEV5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav7-1A0A0G2JEV5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav7-1A0A0G2JEV5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav7-1A0A0G2JEV5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav7-1A0A0G2JEV5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav7-1A0A0G2JEV5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav7-1A0A0G2JEV5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav7-1A0A0G2JEV5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.52■□□□□ 0.72
Trav7-1A0A0G2JEV5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav7-1A0A0G2JEV5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav7-1A0A0G2JEV5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav7-1A0A0G2JEV5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.5■□□□□ 0.71
Trav7-1A0A0G2JEV5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav7-1A0A0G2JEV5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Trav7-1A0A0G2JEV5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav7-1A0A0G2JEV5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav7-1A0A0G2JEV5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav7-1A0A0G2JEV5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav7-1A0A0G2JEV5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trav7-1A0A0G2JEV5 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.46■□□□□ 0.71
Trav7-1A0A0G2JEV5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav7-1A0A0G2JEV5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav7-1A0A0G2JEV5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav7-1A0A0G2JEV5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav7-1A0A0G2JEV5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav7-1A0A0G2JEV5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav7-1A0A0G2JEV5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav7-1A0A0G2JEV5 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.41■□□□□ 0.7
Trav7-1A0A0G2JEV5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav7-1A0A0G2JEV5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav7-1A0A0G2JEV5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Trav7-1A0A0G2JEV5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav7-1A0A0G2JEV5 Gm27322-201ENSMUST00000184007 104 ntBASIC19.39■□□□□ 0.69
Trav7-1A0A0G2JEV5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms