Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Igkv5-43A0A0B4J1J2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.47■■□□□ 1.99
Igkv5-43A0A0B4J1J2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Igkv5-43A0A0B4J1J2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Igkv5-43A0A0B4J1J2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Igkv5-43A0A0B4J1J2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Igkv5-43A0A0B4J1J2 Peli2-204ENSMUST00000226513 1320 ntBASIC27.42■■□□□ 1.98
Igkv5-43A0A0B4J1J2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Igkv5-43A0A0B4J1J2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Igkv5-43A0A0B4J1J2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Igkv5-43A0A0B4J1J2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Igkv5-43A0A0B4J1J2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Igkv5-43A0A0B4J1J2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Igkv5-43A0A0B4J1J2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Igkv5-43A0A0B4J1J2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
Igkv5-43A0A0B4J1J2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Igkv5-43A0A0B4J1J2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Igkv5-43A0A0B4J1J2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Igkv5-43A0A0B4J1J2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Igkv5-43A0A0B4J1J2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Igkv5-43A0A0B4J1J2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Igkv5-43A0A0B4J1J2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Igkv5-43A0A0B4J1J2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Igkv5-43A0A0B4J1J2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Igkv5-43A0A0B4J1J2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.25■■□□□ 1.95
Igkv5-43A0A0B4J1J2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.22■■□□□ 1.95
Igkv5-43A0A0B4J1J2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Igkv5-43A0A0B4J1J2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Igkv5-43A0A0B4J1J2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Igkv5-43A0A0B4J1J2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Igkv5-43A0A0B4J1J2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Igkv5-43A0A0B4J1J2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Igkv5-43A0A0B4J1J2 Gm16148-201ENSMUST00000119653 893 ntBASIC27.16■■□□□ 1.94
Igkv5-43A0A0B4J1J2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Igkv5-43A0A0B4J1J2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Igkv5-43A0A0B4J1J2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Igkv5-43A0A0B4J1J2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
Igkv5-43A0A0B4J1J2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Igkv5-43A0A0B4J1J2 Zfp131-205ENSMUST00000223812 663 ntBASIC27.1■■□□□ 1.93
Igkv5-43A0A0B4J1J2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Igkv5-43A0A0B4J1J2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Igkv5-43A0A0B4J1J2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Igkv5-43A0A0B4J1J2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Igkv5-43A0A0B4J1J2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Igkv5-43A0A0B4J1J2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Igkv5-43A0A0B4J1J2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Igkv5-43A0A0B4J1J2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27■■□□□ 1.91
Igkv5-43A0A0B4J1J2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27■■□□□ 1.91
Igkv5-43A0A0B4J1J2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
Igkv5-43A0A0B4J1J2 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.97■■□□□ 1.91
Igkv5-43A0A0B4J1J2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Igkv5-43A0A0B4J1J2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.9
Igkv5-43A0A0B4J1J2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Igkv5-43A0A0B4J1J2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Igkv5-43A0A0B4J1J2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Igkv5-43A0A0B4J1J2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Igkv5-43A0A0B4J1J2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Igkv5-43A0A0B4J1J2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Igkv5-43A0A0B4J1J2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Igkv5-43A0A0B4J1J2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
Igkv5-43A0A0B4J1J2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Igkv5-43A0A0B4J1J2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Igkv5-43A0A0B4J1J2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Igkv5-43A0A0B4J1J2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Igkv5-43A0A0B4J1J2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Igkv5-43A0A0B4J1J2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Igkv5-43A0A0B4J1J2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.85■■□□□ 1.89
Igkv5-43A0A0B4J1J2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Igkv5-43A0A0B4J1J2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.84■■□□□ 1.89
Igkv5-43A0A0B4J1J2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.83■■□□□ 1.88
Igkv5-43A0A0B4J1J2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.82■■□□□ 1.88
Igkv5-43A0A0B4J1J2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Igkv5-43A0A0B4J1J2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.81■■□□□ 1.88
Igkv5-43A0A0B4J1J2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Igkv5-43A0A0B4J1J2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Igkv5-43A0A0B4J1J2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Igkv5-43A0A0B4J1J2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
Igkv5-43A0A0B4J1J2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.78■■□□□ 1.88
Igkv5-43A0A0B4J1J2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Igkv5-43A0A0B4J1J2 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.75■■□□□ 1.87
Igkv5-43A0A0B4J1J2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Igkv5-43A0A0B4J1J2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.74■■□□□ 1.87
Igkv5-43A0A0B4J1J2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.73■■□□□ 1.87
Igkv5-43A0A0B4J1J2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.72■■□□□ 1.87
Igkv5-43A0A0B4J1J2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
Igkv5-43A0A0B4J1J2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Igkv5-43A0A0B4J1J2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Igkv5-43A0A0B4J1J2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Igkv5-43A0A0B4J1J2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Igkv5-43A0A0B4J1J2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Igkv5-43A0A0B4J1J2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Igkv5-43A0A0B4J1J2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Igkv5-43A0A0B4J1J2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.66■■□□□ 1.86
Igkv5-43A0A0B4J1J2 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.64■■□□□ 1.86
Igkv5-43A0A0B4J1J2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
Igkv5-43A0A0B4J1J2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Igkv5-43A0A0B4J1J2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
Igkv5-43A0A0B4J1J2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Igkv5-43A0A0B4J1J2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.61■■□□□ 1.85
Igkv5-43A0A0B4J1J2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms