Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trbc1A0A0A6YWV4 Gm24804-201ENSMUST00000174982 85 ntBASIC23.96■■□□□ 1.43
Trbc1A0A0A6YWV4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trbc1A0A0A6YWV4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trbc1A0A0A6YWV4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trbc1A0A0A6YWV4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trbc1A0A0A6YWV4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Trbc1A0A0A6YWV4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trbc1A0A0A6YWV4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Trbc1A0A0A6YWV4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Trbc1A0A0A6YWV4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Trbc1A0A0A6YWV4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Trbc1A0A0A6YWV4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Trbc1A0A0A6YWV4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.82■■□□□ 1.4
Trbc1A0A0A6YWV4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trbc1A0A0A6YWV4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.78■■□□□ 1.4
Trbc1A0A0A6YWV4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trbc1A0A0A6YWV4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trbc1A0A0A6YWV4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trbc1A0A0A6YWV4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
Trbc1A0A0A6YWV4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trbc1A0A0A6YWV4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trbc1A0A0A6YWV4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.71■■□□□ 1.39
Trbc1A0A0A6YWV4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trbc1A0A0A6YWV4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.7■■□□□ 1.38
Trbc1A0A0A6YWV4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trbc1A0A0A6YWV4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trbc1A0A0A6YWV4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trbc1A0A0A6YWV4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trbc1A0A0A6YWV4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trbc1A0A0A6YWV4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trbc1A0A0A6YWV4 Peli2-204ENSMUST00000226513 1320 ntBASIC23.64■■□□□ 1.38
Trbc1A0A0A6YWV4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Trbc1A0A0A6YWV4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.63■■□□□ 1.37
Trbc1A0A0A6YWV4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Trbc1A0A0A6YWV4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trbc1A0A0A6YWV4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trbc1A0A0A6YWV4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trbc1A0A0A6YWV4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Trbc1A0A0A6YWV4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Trbc1A0A0A6YWV4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trbc1A0A0A6YWV4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.59■■□□□ 1.37
Trbc1A0A0A6YWV4 Zxda-201ENSMUST00000117281 2621 ntBASIC23.59■■□□□ 1.37
Trbc1A0A0A6YWV4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Trbc1A0A0A6YWV4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trbc1A0A0A6YWV4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trbc1A0A0A6YWV4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Trbc1A0A0A6YWV4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Trbc1A0A0A6YWV4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trbc1A0A0A6YWV4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trbc1A0A0A6YWV4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trbc1A0A0A6YWV4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trbc1A0A0A6YWV4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trbc1A0A0A6YWV4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Trbc1A0A0A6YWV4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.49■■□□□ 1.35
Trbc1A0A0A6YWV4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trbc1A0A0A6YWV4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
Trbc1A0A0A6YWV4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Trbc1A0A0A6YWV4 Gm16148-201ENSMUST00000119653 893 ntBASIC23.47■■□□□ 1.35
Trbc1A0A0A6YWV4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
Trbc1A0A0A6YWV4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trbc1A0A0A6YWV4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trbc1A0A0A6YWV4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trbc1A0A0A6YWV4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trbc1A0A0A6YWV4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trbc1A0A0A6YWV4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trbc1A0A0A6YWV4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Trbc1A0A0A6YWV4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trbc1A0A0A6YWV4 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.38■■□□□ 1.33
Trbc1A0A0A6YWV4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trbc1A0A0A6YWV4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trbc1A0A0A6YWV4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trbc1A0A0A6YWV4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trbc1A0A0A6YWV4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trbc1A0A0A6YWV4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.32■■□□□ 1.32
Trbc1A0A0A6YWV4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trbc1A0A0A6YWV4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trbc1A0A0A6YWV4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trbc1A0A0A6YWV4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trbc1A0A0A6YWV4 Zfp131-205ENSMUST00000223812 663 ntBASIC23.29■■□□□ 1.32
Trbc1A0A0A6YWV4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Trbc1A0A0A6YWV4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trbc1A0A0A6YWV4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trbc1A0A0A6YWV4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trbc1A0A0A6YWV4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trbc1A0A0A6YWV4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trbc1A0A0A6YWV4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Trbc1A0A0A6YWV4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trbc1A0A0A6YWV4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trbc1A0A0A6YWV4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trbc1A0A0A6YWV4 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.23■■□□□ 1.31
Trbc1A0A0A6YWV4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trbc1A0A0A6YWV4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Trbc1A0A0A6YWV4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
Trbc1A0A0A6YWV4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.22■■□□□ 1.31
Trbc1A0A0A6YWV4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trbc1A0A0A6YWV4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.21■■□□□ 1.31
Trbc1A0A0A6YWV4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.2■■□□□ 1.3
Trbc1A0A0A6YWV4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trbc1A0A0A6YWV4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms