Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13-2A0A075B649 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.22■□□□□ 0.35
Trav13-2A0A075B649 Rab21-202ENSMUST00000218831 843 ntBASIC17.22■□□□□ 0.35
Trav13-2A0A075B649 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13-2A0A075B649 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav13-2A0A075B649 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13-2A0A075B649 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13-2A0A075B649 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13-2A0A075B649 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13-2A0A075B649 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.17■□□□□ 0.34
Trav13-2A0A075B649 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17.17■□□□□ 0.34
Trav13-2A0A075B649 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13-2A0A075B649 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13-2A0A075B649 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13-2A0A075B649 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13-2A0A075B649 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.15■□□□□ 0.34
Trav13-2A0A075B649 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav13-2A0A075B649 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13-2A0A075B649 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13-2A0A075B649 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13-2A0A075B649 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13-2A0A075B649 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13-2A0A075B649 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13-2A0A075B649 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trav13-2A0A075B649 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13-2A0A075B649 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav13-2A0A075B649 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13-2A0A075B649 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13-2A0A075B649 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav13-2A0A075B649 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13-2A0A075B649 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13-2A0A075B649 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13-2A0A075B649 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav13-2A0A075B649 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13-2A0A075B649 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13-2A0A075B649 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13-2A0A075B649 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13-2A0A075B649 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13-2A0A075B649 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13-2A0A075B649 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav13-2A0A075B649 Zxda-201ENSMUST00000117281 2621 ntBASIC17.01■□□□□ 0.31
Trav13-2A0A075B649 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13-2A0A075B649 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13-2A0A075B649 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13-2A0A075B649 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13-2A0A075B649 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13-2A0A075B649 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav13-2A0A075B649 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13-2A0A075B649 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.98■□□□□ 0.31
Trav13-2A0A075B649 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13-2A0A075B649 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav13-2A0A075B649 Mipep-204ENSMUST00000225043 1548 ntBASIC16.97■□□□□ 0.31
Trav13-2A0A075B649 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.97■□□□□ 0.31
Trav13-2A0A075B649 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13-2A0A075B649 Gm9905-201ENSMUST00000065740 1845 ntBASIC16.96■□□□□ 0.3
Trav13-2A0A075B649 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav13-2A0A075B649 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13-2A0A075B649 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13-2A0A075B649 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.94■□□□□ 0.3
Trav13-2A0A075B649 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13-2A0A075B649 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13-2A0A075B649 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav13-2A0A075B649 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav13-2A0A075B649 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-2A0A075B649 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-2A0A075B649 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav13-2A0A075B649 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav13-2A0A075B649 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav13-2A0A075B649 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav13-2A0A075B649 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Trav13-2A0A075B649 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13-2A0A075B649 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13-2A0A075B649 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13-2A0A075B649 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13-2A0A075B649 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13-2A0A075B649 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav13-2A0A075B649 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav13-2A0A075B649 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13-2A0A075B649 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13-2A0A075B649 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13-2A0A075B649 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13-2A0A075B649 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trav13-2A0A075B649 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav13-2A0A075B649 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13-2A0A075B649 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13-2A0A075B649 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13-2A0A075B649 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13-2A0A075B649 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Trav13-2A0A075B649 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13-2A0A075B649 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13-2A0A075B649 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav13-2A0A075B649 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13-2A0A075B649 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13-2A0A075B649 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13-2A0A075B649 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.8■□□□□ 0.28
Trav13-2A0A075B649 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13-2A0A075B649 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13-2A0A075B649 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13-2A0A075B649 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.79■□□□□ 0.28
Trav13-2A0A075B649 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms