Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19,68■□□□□ 0,74
Trav7n-4A0A075B620 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19,67■□□□□ 0,74
Trav7n-4A0A075B620 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19,66■□□□□ 0,74
Trav7n-4A0A075B620 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19,66■□□□□ 0,74
Trav7n-4A0A075B620 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19,66■□□□□ 0,74
Trav7n-4A0A075B620 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19,65■□□□□ 0,74
Trav7n-4A0A075B620 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19,64■□□□□ 0,73
Trav7n-4A0A075B620 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19,63■□□□□ 0,73
Trav7n-4A0A075B620 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19,63■□□□□ 0,73
Trav7n-4A0A075B620 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19,63■□□□□ 0,73
Trav7n-4A0A075B620 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19,62■□□□□ 0,73
Trav7n-4A0A075B620 Gm43445-201ENSMUST00000198564 2091 ntBASIC19,62■□□□□ 0,73
Trav7n-4A0A075B620 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19,61■□□□□ 0,73
Trav7n-4A0A075B620 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19,61■□□□□ 0,73
Trav7n-4A0A075B620 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19,61■□□□□ 0,73
Trav7n-4A0A075B620 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19,59■□□□□ 0,73
Trav7n-4A0A075B620 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19,59■□□□□ 0,73
Trav7n-4A0A075B620 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19,57■□□□□ 0,72
Trav7n-4A0A075B620 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19,57■□□□□ 0,72
Trav7n-4A0A075B620 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19,56■□□□□ 0,72
Trav7n-4A0A075B620 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19,56■□□□□ 0,72
Trav7n-4A0A075B620 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19,55■□□□□ 0,72
Trav7n-4A0A075B620 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19,55■□□□□ 0,72
Trav7n-4A0A075B620 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19,53■□□□□ 0,72
Trav7n-4A0A075B620 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19,52■□□□□ 0,72
Trav7n-4A0A075B620 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19,51■□□□□ 0,71
Trav7n-4A0A075B620 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19,49■□□□□ 0,71
Trav7n-4A0A075B620 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19,49■□□□□ 0,71
Trav7n-4A0A075B620 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19,49■□□□□ 0,71
Trav7n-4A0A075B620 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19,49■□□□□ 0,71
Trav7n-4A0A075B620 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19,48■□□□□ 0,71
Trav7n-4A0A075B620 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19,48■□□□□ 0,71
Trav7n-4A0A075B620 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19,47■□□□□ 0,71
Trav7n-4A0A075B620 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19,47■□□□□ 0,71
Trav7n-4A0A075B620 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19,46■□□□□ 0,71
Trav7n-4A0A075B620 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19,45■□□□□ 0,7
Trav7n-4A0A075B620 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19,45■□□□□ 0,7
Trav7n-4A0A075B620 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19,45■□□□□ 0,7
Trav7n-4A0A075B620 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19,45■□□□□ 0,7
Trav7n-4A0A075B620 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19,44■□□□□ 0,7
Trav7n-4A0A075B620 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19,43■□□□□ 0,7
Trav7n-4A0A075B620 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19,42■□□□□ 0,7
Trav7n-4A0A075B620 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19,42■□□□□ 0,7
Trav7n-4A0A075B620 Amer2-203ENSMUST00000225247 2662 ntBASIC19,42■□□□□ 0,7
Trav7n-4A0A075B620 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19,41■□□□□ 0,7
Trav7n-4A0A075B620 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19,41■□□□□ 0,7
Trav7n-4A0A075B620 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19,41■□□□□ 0,7
Trav7n-4A0A075B620 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19,41■□□□□ 0,7
Trav7n-4A0A075B620 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19,39■□□□□ 0,69
Trav7n-4A0A075B620 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19,39■□□□□ 0,69
Trav7n-4A0A075B620 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19,38■□□□□ 0,69
Trav7n-4A0A075B620 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19,37■□□□□ 0,69
Trav7n-4A0A075B620 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19,35■□□□□ 0,69
Trav7n-4A0A075B620 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19,34■□□□□ 0,69
Trav7n-4A0A075B620 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19,34■□□□□ 0,69
Trav7n-4A0A075B620 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19,33■□□□□ 0,69
Trav7n-4A0A075B620 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19,32■□□□□ 0,68
Trav7n-4A0A075B620 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19,31■□□□□ 0,68
Trav7n-4A0A075B620 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19,31■□□□□ 0,68
Trav7n-4A0A075B620 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19,31■□□□□ 0,68
Trav7n-4A0A075B620 Fezf2-202ENSMUST00000224023 1917 ntBASIC19,3■□□□□ 0,68
Trav7n-4A0A075B620 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19,29■□□□□ 0,68
Trav7n-4A0A075B620 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19,29■□□□□ 0,68
Trav7n-4A0A075B620 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19,29■□□□□ 0,68
Trav7n-4A0A075B620 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19,28■□□□□ 0,68
Trav7n-4A0A075B620 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19,28■□□□□ 0,68
Trav7n-4A0A075B620 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19,28■□□□□ 0,68
Trav7n-4A0A075B620 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19,28■□□□□ 0,68
Trav7n-4A0A075B620 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19,27■□□□□ 0,68
Trav7n-4A0A075B620 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19,27■□□□□ 0,68
Trav7n-4A0A075B620 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19,26■□□□□ 0,67
Trav7n-4A0A075B620 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19,26■□□□□ 0,67
Trav7n-4A0A075B620 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19,24■□□□□ 0,67
Trav7n-4A0A075B620 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19,24■□□□□ 0,67
Trav7n-4A0A075B620 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19,23■□□□□ 0,67
Trav7n-4A0A075B620 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19,22■□□□□ 0,67
Trav7n-4A0A075B620 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19,21■□□□□ 0,67
Trav7n-4A0A075B620 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19,2■□□□□ 0,66
Trav7n-4A0A075B620 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19,19■□□□□ 0,66
Trav7n-4A0A075B620 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19,19■□□□□ 0,66
Trav7n-4A0A075B620 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19,19■□□□□ 0,66
Trav7n-4A0A075B620 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19,18■□□□□ 0,66
Trav7n-4A0A075B620 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19,16■□□□□ 0,66
Trav7n-4A0A075B620 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19,16■□□□□ 0,66
Trav7n-4A0A075B620 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19,16■□□□□ 0,66
Trav7n-4A0A075B620 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19,16■□□□□ 0,66
Trav7n-4A0A075B620 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19,16■□□□□ 0,66
Trav7n-4A0A075B620 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19,15■□□□□ 0,66
Trav7n-4A0A075B620 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19,15■□□□□ 0,66
Trav7n-4A0A075B620 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19,15■□□□□ 0,66
Trav7n-4A0A075B620 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19,15■□□□□ 0,66
Trav7n-4A0A075B620 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19,14■□□□□ 0,66
Trav7n-4A0A075B620 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19,13■□□□□ 0,65
Trav7n-4A0A075B620 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19,12■□□□□ 0,65
Trav7n-4A0A075B620 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19,12■□□□□ 0,65
Trav7n-4A0A075B620 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19,11■□□□□ 0,65
Trav7n-4A0A075B620 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19,11■□□□□ 0,65
Trav7n-4A0A075B620 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19,1■□□□□ 0,65
Trav7n-4A0A075B620 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19,1■□□□□ 0,65
Trav7n-4A0A075B620 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19,1■□□□□ 0,65
Retrieved 100 of 76,532 protein–RNA pairs in 8,7 ms