Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Trav6-6A0A075B603 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-6A0A075B603 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6-6A0A075B603 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6-6A0A075B603 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.14■□□□□ 0.65
Trav6-6A0A075B603 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.14■□□□□ 0.65
Trav6-6A0A075B603 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6-6A0A075B603 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6-6A0A075B603 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Trav6-6A0A075B603 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trav6-6A0A075B603 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-6A0A075B603 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trav6-6A0A075B603 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-6A0A075B603 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-6A0A075B603 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trav6-6A0A075B603 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6-6A0A075B603 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav6-6A0A075B603 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-6A0A075B603 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
Trav6-6A0A075B603 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-6A0A075B603 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-6A0A075B603 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.04■□□□□ 0.64
Trav6-6A0A075B603 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-6A0A075B603 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6-6A0A075B603 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav6-6A0A075B603 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trav6-6A0A075B603 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trav6-6A0A075B603 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-6A0A075B603 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-6A0A075B603 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-6A0A075B603 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6-6A0A075B603 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6-6A0A075B603 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6-6A0A075B603 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trav6-6A0A075B603 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav6-6A0A075B603 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6-6A0A075B603 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6-6A0A075B603 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-6A0A075B603 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trav6-6A0A075B603 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-6A0A075B603 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-6A0A075B603 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6-6A0A075B603 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6-6A0A075B603 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6-6A0A075B603 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6-6A0A075B603 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trav6-6A0A075B603 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-6A0A075B603 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Trav6-6A0A075B603 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.93■□□□□ 0.62
Trav6-6A0A075B603 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6-6A0A075B603 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-6A0A075B603 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-6A0A075B603 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-6A0A075B603 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-6A0A075B603 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-6A0A075B603 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trav6-6A0A075B603 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trav6-6A0A075B603 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6-6A0A075B603 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trav6-6A0A075B603 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-6A0A075B603 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.86■□□□□ 0.61
Trav6-6A0A075B603 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-6A0A075B603 Gm25262-201ENSMUST00000174934 133 ntBASIC18.86■□□□□ 0.61
Trav6-6A0A075B603 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-6A0A075B603 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-6A0A075B603 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6-6A0A075B603 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-6A0A075B603 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-6A0A075B603 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-6A0A075B603 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-6A0A075B603 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-6A0A075B603 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trav6-6A0A075B603 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6-6A0A075B603 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6-6A0A075B603 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-6A0A075B603 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-6A0A075B603 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6-6A0A075B603 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.74■□□□□ 0.59
Trav6-6A0A075B603 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6-6A0A075B603 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-6A0A075B603 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav6-6A0A075B603 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-6A0A075B603 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trav6-6A0A075B603 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6-6A0A075B603 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6-6A0A075B603 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6-6A0A075B603 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.7■□□□□ 0.58
Trav6-6A0A075B603 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trav6-6A0A075B603 Amer2-203ENSMUST00000225247 2662 ntBASIC18.69■□□□□ 0.58
Trav6-6A0A075B603 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6-6A0A075B603 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6-6A0A075B603 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6-6A0A075B603 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-6A0A075B603 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-6A0A075B603 Mipep-204ENSMUST00000225043 1548 ntBASIC18.66■□□□□ 0.58
Trav6-6A0A075B603 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-6A0A075B603 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.65■□□□□ 0.58
Trav6-6A0A075B603 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trav6-6A0A075B603 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6-6A0A075B603 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms