Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 AC007952.5-201ENST00000572818 1486 ntBASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 AC145423.3-201ENST00000615987 467 ntBASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 CIC-204ENST00000572681 8218 ntTSL 5 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 MANEA-AS1-201ENST00000564541 2268 ntBASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 DDX12P-201ENST00000432996 2947 ntBASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 AL031432.4-201ENST00000641729 2190 ntBASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 AC098850.1-201ENST00000419919 790 ntBASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
RCL1Q9Y2P8 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC11.46□□□□□ -0.58
RCL1Q9Y2P8 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
RCL1Q9Y2P8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RCL1Q9Y2P8 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RCL1Q9Y2P8 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RCL1Q9Y2P8 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
RCL1Q9Y2P8 AC090114.2-201ENST00000608477 7054 ntBASIC11.46□□□□□ -0.58
RCL1Q9Y2P8 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms