Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 AC022080.1-201ENST00000366255 781 ntBASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 COX20P1-201ENST00000366529 357 ntBASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 SURF4-203ENST00000371991 715 ntTSL 3 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 GNG10P1-201ENST00000452289 199 ntBASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 AL022344.2-201ENST00000568976 968 ntBASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 AC126755.5-201ENST00000622756 267 ntBASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 ESR1-214ENST00000638569 132 ntTSL 5 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 KRT8P42-201ENST00000405771 1399 ntBASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 PI4KAP2-201ENST00000360806 2080 ntBASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 AC105206.1-202ENST00000314927 2368 ntBASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 FAM90A21P-201ENST00000510875 1396 ntBASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 FAM90A15P-201ENST00000514465 1395 ntBASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 FAM90A6P-201ENST00000515148 1394 ntBASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 FAM90A16P-201ENST00000526662 1395 ntBASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 FAM90A9P-201ENST00000527940 1395 ntBASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 FAM90A5P-201ENST00000528738 1395 ntBASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 FAM90A14P-201ENST00000530386 1395 ntBASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 FAM90A13P-201ENST00000534703 1395 ntBASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 U3.5-201ENST00000363448 216 ntBASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 OR7E115P-201ENST00000382617 1024 ntBASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 AL135901.1-201ENST00000451812 333 ntBASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
KIAA1549Q9HCM3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.25□□□□□ -0.45
KIAA1549Q9HCM3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
KIAA1549Q9HCM3 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
KIAA1549Q9HCM3 AL358781.1-202ENST00000321081 1360 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms