Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 AC005562.1-201ENST00000583030 3219 ntBASIC13.09□□□□□ -0.31
NUP43Q8NFH3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 AC073869.2-201ENST00000417338 1026 ntBASIC13.09□□□□□ -0.31
NUP43Q8NFH3 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.09□□□□□ -0.31
NUP43Q8NFH3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 AL596276.2-201ENST00000447525 331 ntBASIC13.09□□□□□ -0.31
NUP43Q8NFH3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 NDUFB10P1-201ENST00000567319 521 ntBASIC13.09□□□□□ -0.31
NUP43Q8NFH3 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 MIR6769A-201ENST00000617340 73 ntBASIC13.09□□□□□ -0.31
NUP43Q8NFH3 AL591122.2-201ENST00000624125 1853 ntBASIC13.09□□□□□ -0.31
NUP43Q8NFH3 AL161773.1-201ENST00000624845 863 ntBASIC13.09□□□□□ -0.31
NUP43Q8NFH3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 AL445209.1-201ENST00000607269 3491 ntBASIC13.09□□□□□ -0.31
NUP43Q8NFH3 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NUP43Q8NFH3 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NUP43Q8NFH3 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NUP43Q8NFH3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
NUP43Q8NFH3 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
NUP43Q8NFH3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 AC108024.1-201ENST00000626286 1721 ntBASIC13.08□□□□□ -0.32
NUP43Q8NFH3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms