Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
VARSP26640 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.89□□□□□ -0.19
VARSP26640 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 USP17L6P-201ENST00000382470 1197 ntBASIC13.89□□□□□ -0.19
VARSP26640 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
VARSP26640 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC13.89□□□□□ -0.19
VARSP26640 AC011742.3-201ENST00000439053 820 ntBASIC13.89□□□□□ -0.19
VARSP26640 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC13.89□□□□□ -0.19
VARSP26640 AC007919.2-201ENST00000444110 511 ntBASIC13.89□□□□□ -0.19
VARSP26640 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.89□□□□□ -0.19
VARSP26640 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.89□□□□□ -0.19
VARSP26640 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.89□□□□□ -0.19
VARSP26640 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
VARSP26640 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 AC027281.2-201ENST00000623856 713 ntBASIC13.89□□□□□ -0.19
VARSP26640 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.89□□□□□ -0.19
VARSP26640 AC092299.1-201ENST00000632679 757 ntBASIC13.89□□□□□ -0.19
VARSP26640 AC009452.1-201ENST00000640823 606 ntBASIC13.89□□□□□ -0.19
VARSP26640 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
VARSP26640 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 AC018629.1-201ENST00000623381 1736 ntBASIC13.89□□□□□ -0.19
VARSP26640 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 AOC4P-203ENST00000566825 2289 ntBASIC13.89□□□□□ -0.19
VARSP26640 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.89□□□□□ -0.19
VARSP26640 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 VENTXP1-201ENST00000569334 2716 ntBASIC13.89□□□□□ -0.19
VARSP26640 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 BX324167.2-201ENST00000623717 3316 ntBASIC13.89□□□□□ -0.19
VARSP26640 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.88□□□□□ -0.19
VARSP26640 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.88□□□□□ -0.19
VARSP26640 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 AC131212.3-201ENST00000624087 4219 ntBASIC13.88□□□□□ -0.19
VARSP26640 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.88□□□□□ -0.19
VARSP26640 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.88□□□□□ -0.19
VARSP26640 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 OR2R1P-201ENST00000441404 914 ntBASIC13.88□□□□□ -0.19
VARSP26640 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 AC104073.2-201ENST00000453737 312 ntBASIC13.88□□□□□ -0.19
VARSP26640 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 HLA-J-204ENST00000495278 958 ntBASIC13.88□□□□□ -0.19
VARSP26640 AC022217.1-201ENST00000521069 738 ntBASIC13.88□□□□□ -0.19
VARSP26640 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.88□□□□□ -0.19
VARSP26640 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.88□□□□□ -0.19
VARSP26640 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.88□□□□□ -0.19
VARSP26640 MIR4722-201ENST00000578292 60 ntBASIC13.88□□□□□ -0.19
VARSP26640 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.88□□□□□ -0.19
VARSP26640 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.88□□□□□ -0.19
VARSP26640 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.88□□□□□ -0.19
VARSP26640 AL451050.2-201ENST00000606967 682 ntBASIC13.88□□□□□ -0.19
VARSP26640 AC091544.8-201ENST00000619490 361 ntBASIC13.88□□□□□ -0.19
VARSP26640 AL157762.1-201ENST00000619612 415 ntBASIC13.88□□□□□ -0.19
VARSP26640 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.88□□□□□ -0.19
VARSP26640 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 AC128714.1-201ENST00000637035 887 ntBASIC13.88□□□□□ -0.19
VARSP26640 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
VARSP26640 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
VARSP26640 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms