Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.23□□□□□ -0.13
NFKB1P19838 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NFKB1P19838 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.22□□□□□ -0.13
NFKB1P19838 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.22□□□□□ -0.13
NFKB1P19838 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 PCDHA5-203ENST00000614258 4248 ntBASIC14.22□□□□□ -0.13
NFKB1P19838 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.22□□□□□ -0.13
NFKB1P19838 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NFKB1P19838 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NFKB1P19838 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NFKB1P19838 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
NFKB1P19838 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 MIR769-201ENST00000390225 118 ntBASIC14.22□□□□□ -0.13
NFKB1P19838 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.22□□□□□ -0.13
NFKB1P19838 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.22□□□□□ -0.13
NFKB1P19838 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.22□□□□□ -0.13
NFKB1P19838 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.22□□□□□ -0.13
NFKB1P19838 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.22□□□□□ -0.13
NFKB1P19838 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.22□□□□□ -0.13
NFKB1P19838 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.22□□□□□ -0.13
NFKB1P19838 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
NFKB1P19838 ACTG1P17-201ENST00000558391 1119 ntBASIC14.22□□□□□ -0.13
NFKB1P19838 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.22□□□□□ -0.13
NFKB1P19838 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.22□□□□□ -0.13
NFKB1P19838 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NFKB1P19838 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.22□□□□□ -0.13
NFKB1P19838 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.22□□□□□ -0.13
NFKB1P19838 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.22□□□□□ -0.13
NFKB1P19838 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.22□□□□□ -0.13
NFKB1P19838 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NFKB1P19838 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.22□□□□□ -0.13
NFKB1P19838 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NFKB1P19838 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 KRT8P18-201ENST00000413425 1445 ntBASIC14.22□□□□□ -0.13
NFKB1P19838 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NFKB1P19838 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.22□□□□□ -0.13
NFKB1P19838 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.22□□□□□ -0.13
NFKB1P19838 TCAF1P1-201ENST00000414990 2232 ntBASIC14.22□□□□□ -0.13
NFKB1P19838 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NFKB1P19838 Z98885.3-201ENST00000624882 1757 ntBASIC14.22□□□□□ -0.13
NFKB1P19838 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.22□□□□□ -0.13
NFKB1P19838 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 AL133338.1-201ENST00000565695 1517 ntBASIC14.21□□□□□ -0.13
NFKB1P19838 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.21□□□□□ -0.13
NFKB1P19838 AC005252.3-201ENST00000623855 2258 ntBASIC14.21□□□□□ -0.13
NFKB1P19838 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NFKB1P19838 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NFKB1P19838 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NFKB1P19838 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.21□□□□□ -0.13
NFKB1P19838 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.21□□□□□ -0.13
NFKB1P19838 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NFKB1P19838 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 AC020763.3-201ENST00000625095 2904 ntBASIC14.21□□□□□ -0.13
NFKB1P19838 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
NFKB1P19838 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.21□□□□□ -0.13
NFKB1P19838 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.21□□□□□ -0.13
NFKB1P19838 PDIA3P2-201ENST00000428073 158 ntBASIC14.21□□□□□ -0.13
NFKB1P19838 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC14.21□□□□□ -0.13
NFKB1P19838 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NFKB1P19838 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 AC012618.1-201ENST00000461223 412 ntBASIC14.21□□□□□ -0.13
NFKB1P19838 AC098799.1-201ENST00000504752 800 ntBASIC14.21□□□□□ -0.13
NFKB1P19838 AC024681.1-201ENST00000521917 487 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms