Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 FDX1P1-201ENST00000449115 551 ntBASIC12.52□□□□□ -0.41
SSR3Q9UNL2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 AC092117.1-201ENST00000621230 3250 ntBASIC12.52□□□□□ -0.41
SSR3Q9UNL2 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSR3Q9UNL2 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.51□□□□□ -0.41
SSR3Q9UNL2 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 CICP12-201ENST00000455801 843 ntBASIC12.51□□□□□ -0.41
SSR3Q9UNL2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 DOC2GP-202ENST00000514950 1163 ntBASIC12.51□□□□□ -0.41
SSR3Q9UNL2 AC109322.1-201ENST00000524499 1264 ntBASIC12.51□□□□□ -0.41
SSR3Q9UNL2 AC104794.3-201ENST00000566840 1248 ntBASIC12.51□□□□□ -0.41
SSR3Q9UNL2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 AC134407.3-201ENST00000624035 2139 ntBASIC12.51□□□□□ -0.41
SSR3Q9UNL2 AC005252.2-201ENST00000624630 1141 ntBASIC12.51□□□□□ -0.41
SSR3Q9UNL2 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.51□□□□□ -0.41
SSR3Q9UNL2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms