Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 HSPA7-201ENST00000445535 1927 ntBASIC14.51□□□□□ -0.09
ERVFC1P60507 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
ERVFC1P60507 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.51□□□□□ -0.09
ERVFC1P60507 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC14.51□□□□□ -0.09
ERVFC1P60507 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ERVFC1P60507 FDPSP7-201ENST00000429043 1054 ntBASIC14.51□□□□□ -0.09
ERVFC1P60507 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC14.51□□□□□ -0.09
ERVFC1P60507 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.51□□□□□ -0.09
ERVFC1P60507 RN7SL578P-201ENST00000477781 283 ntBASIC14.51□□□□□ -0.09
ERVFC1P60507 RPL29P2-201ENST00000488409 460 ntBASIC14.51□□□□□ -0.09
ERVFC1P60507 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ERVFC1P60507 GPX3-202ENST00000517973 612 ntTSL 3 BASIC14.51□□□□□ -0.09
ERVFC1P60507 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC14.51□□□□□ -0.09
ERVFC1P60507 MBP-230ENST00000528160 584 ntTSL 5 BASIC14.51□□□□□ -0.09
ERVFC1P60507 PHBP18-201ENST00000546648 813 ntBASIC14.51□□□□□ -0.09
ERVFC1P60507 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.51□□□□□ -0.09
ERVFC1P60507 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC14.51□□□□□ -0.09
ERVFC1P60507 AC137723.2-201ENST00000623540 398 ntBASIC14.51□□□□□ -0.09
ERVFC1P60507 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.51□□□□□ -0.09
ERVFC1P60507 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.51□□□□□ -0.09
ERVFC1P60507 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.51□□□□□ -0.09
ERVFC1P60507 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ERVFC1P60507 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.51□□□□□ -0.09
ERVFC1P60507 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.51□□□□□ -0.09
ERVFC1P60507 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.51□□□□□ -0.09
ERVFC1P60507 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
ERVFC1P60507 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.51□□□□□ -0.09
ERVFC1P60507 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.5□□□□□ -0.09
ERVFC1P60507 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.5□□□□□ -0.09
ERVFC1P60507 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ERVFC1P60507 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ERVFC1P60507 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.5□□□□□ -0.09
ERVFC1P60507 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC14.5□□□□□ -0.09
ERVFC1P60507 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
ERVFC1P60507 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
ERVFC1P60507 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
ERVFC1P60507 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 KRT18P33-201ENST00000398525 1043 ntBASIC14.5□□□□□ -0.09
ERVFC1P60507 CD37-203ENST00000426897 1204 ntTSL 2 BASIC14.5□□□□□ -0.09
ERVFC1P60507 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC14.5□□□□□ -0.09
ERVFC1P60507 AC015818.1-201ENST00000451011 244 ntBASIC14.5□□□□□ -0.09
ERVFC1P60507 PSME2P2-201ENST00000453033 700 ntBASIC14.5□□□□□ -0.09
ERVFC1P60507 AP000533.1-201ENST00000456143 1177 ntBASIC14.5□□□□□ -0.09
ERVFC1P60507 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC14.5□□□□□ -0.09
ERVFC1P60507 RN7SL684P-201ENST00000465665 294 ntBASIC14.5□□□□□ -0.09
ERVFC1P60507 RPL29P2-202ENST00000498671 657 ntBASIC14.5□□□□□ -0.09
ERVFC1P60507 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC14.5□□□□□ -0.09
ERVFC1P60507 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC14.5□□□□□ -0.09
ERVFC1P60507 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC14.5□□□□□ -0.09
ERVFC1P60507 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC14.5□□□□□ -0.09
ERVFC1P60507 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC14.5□□□□□ -0.09
ERVFC1P60507 AC080013.5-201ENST00000607044 679 ntBASIC14.5□□□□□ -0.09
ERVFC1P60507 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
ERVFC1P60507 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC14.5□□□□□ -0.09
ERVFC1P60507 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
ERVFC1P60507 FMO6P-201ENST00000236166 1620 ntBASIC14.5□□□□□ -0.09
ERVFC1P60507 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
ERVFC1P60507 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.5□□□□□ -0.09
ERVFC1P60507 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.5□□□□□ -0.09
ERVFC1P60507 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.5□□□□□ -0.09
ERVFC1P60507 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ERVFC1P60507 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms