Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC15□□□□□ -0.01
HTTP42858 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15□□□□□ -0.01
HTTP42858 AC079944.2-201ENST00000478867 734 ntBASIC15□□□□□ -0.01
HTTP42858 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC15□□□□□ -0.01
HTTP42858 AC022447.6-201ENST00000515522 438 ntBASIC15□□□□□ -0.01
HTTP42858 PTS-204ENST00000525803 625 ntTSL 3 BASIC15□□□□□ -0.01
HTTP42858 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC15□□□□□ -0.01
HTTP42858 MIR941-1-201ENST00000636396 72 ntBASIC15□□□□□ -0.01
HTTP42858 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15□□□□□ -0.01
HTTP42858 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HTTP42858 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15□□□□□ -0.01
HTTP42858 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15□□□□□ -0.01
HTTP42858 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HTTP42858 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.99□□□□□ -0.01
HTTP42858 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HTTP42858 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC14.99□□□□□ -0.01
HTTP42858 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC14.99□□□□□ -0.01
HTTP42858 AP000553.2-201ENST00000609038 441 ntBASIC14.99□□□□□ -0.01
HTTP42858 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.99□□□□□ -0.01
HTTP42858 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.99□□□□□ -0.01
HTTP42858 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 AL021407.3-201ENST00000407522 486 ntBASIC14.99□□□□□ -0.01
HTTP42858 CNN2P1-201ENST00000453616 918 ntBASIC14.99□□□□□ -0.01
HTTP42858 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HTTP42858 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC14.99□□□□□ -0.01
HTTP42858 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC14.99□□□□□ -0.01
HTTP42858 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC14.99□□□□□ -0.01
HTTP42858 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC14.99□□□□□ -0.01
HTTP42858 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC14.99□□□□□ -0.01
HTTP42858 AC068134.4-201ENST00000613365 122 ntBASIC14.99□□□□□ -0.01
HTTP42858 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC14.99□□□□□ -0.01
HTTP42858 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 RCC2P1-201ENST00000452257 1476 ntBASIC14.99□□□□□ -0.01
HTTP42858 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC14.99□□□□□ -0.01
HTTP42858 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC14.99□□□□□ -0.01
HTTP42858 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC14.99□□□□□ -0.01
HTTP42858 SLC25A5P6-201ENST00000515328 886 ntBASIC14.99□□□□□ -0.01
HTTP42858 MIR2277-201ENST00000515916 93 ntBASIC14.99□□□□□ -0.01
HTTP42858 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC14.99□□□□□ -0.01
HTTP42858 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HTTP42858 AC010601.2-201ENST00000623060 774 ntBASIC14.99□□□□□ -0.01
HTTP42858 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HTTP42858 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HTTP42858 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HTTP42858 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HTTP42858 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HTTP42858 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HTTP42858 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HTTP42858 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HTTP42858 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.98□□□□□ -0.01
HTTP42858 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HTTP42858 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HTTP42858 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HTTP42858 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HTTP42858 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HTTP42858 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HTTP42858 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
HTTP42858 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HTTP42858 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.98□□□□□ -0.01
HTTP42858 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HTTP42858 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC14.98□□□□□ -0.01
HTTP42858 AC108082.1-201ENST00000510857 331 ntBASIC14.98□□□□□ -0.01
HTTP42858 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC14.98□□□□□ -0.01
HTTP42858 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.98□□□□□ -0.01
HTTP42858 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HTTP42858 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
HTTP42858 AC103706.1-201ENST00000561761 679 ntBASIC14.98□□□□□ -0.01
HTTP42858 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC14.98□□□□□ -0.01
HTTP42858 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC14.98□□□□□ -0.01
HTTP42858 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HTTP42858 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HTTP42858 AC027601.5-201ENST00000624065 2482 ntBASIC14.98□□□□□ -0.01
HTTP42858 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.98□□□□□ -0.01
HTTP42858 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HTTP42858 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC14.98□□□□□ -0.01
HTTP42858 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HTTP42858 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC14.98□□□□□ -0.01
HTTP42858 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC14.98□□□□□ -0.01
HTTP42858 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.98□□□□□ -0.01
HTTP42858 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
HTTP42858 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC14.98□□□□□ -0.01
HTTP42858 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HTTP42858 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.98□□□□□ -0.01
HTTP42858 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 246.8 ms