Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
FREM3P0C091 RCC2P1-201ENST00000452257 1476 ntBASIC12.69□□□□□ -0.38
FREM3P0C091 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
FREM3P0C091 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.68□□□□□ -0.38
FREM3P0C091 AL627389.1-201ENST00000413508 1182 ntBASIC12.68□□□□□ -0.38
FREM3P0C091 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.68□□□□□ -0.38
FREM3P0C091 MPRIPP1-201ENST00000452433 1089 ntBASIC12.68□□□□□ -0.38
FREM3P0C091 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.68□□□□□ -0.38
FREM3P0C091 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.68□□□□□ -0.38
FREM3P0C091 AP001065.2-201ENST00000617205 644 ntBASIC12.68□□□□□ -0.38
FREM3P0C091 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
FREM3P0C091 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.68□□□□□ -0.38
FREM3P0C091 AC007326.2-201ENST00000624224 7579 ntBASIC12.68□□□□□ -0.38
FREM3P0C091 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.68□□□□□ -0.38
FREM3P0C091 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.68□□□□□ -0.38
FREM3P0C091 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
FREM3P0C091 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.68□□□□□ -0.38
FREM3P0C091 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.68□□□□□ -0.38
FREM3P0C091 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.68□□□□□ -0.38
FREM3P0C091 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.68□□□□□ -0.38
FREM3P0C091 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.68□□□□□ -0.38
FREM3P0C091 AP000911.2-201ENST00000534330 502 ntBASIC12.68□□□□□ -0.38
FREM3P0C091 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 AL031713.1-201ENST00000564813 661 ntBASIC12.68□□□□□ -0.38
FREM3P0C091 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.68□□□□□ -0.38
FREM3P0C091 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.68□□□□□ -0.38
FREM3P0C091 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.68□□□□□ -0.38
FREM3P0C091 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FREM3P0C091 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
FREM3P0C091 AC007952.5-201ENST00000572818 1486 ntBASIC12.68□□□□□ -0.38
FREM3P0C091 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FREM3P0C091 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 AC019294.4-201ENST00000561777 2905 ntBASIC12.67□□□□□ -0.38
FREM3P0C091 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.67□□□□□ -0.38
FREM3P0C091 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.67□□□□□ -0.38
FREM3P0C091 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.67□□□□□ -0.38
FREM3P0C091 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.67□□□□□ -0.38
FREM3P0C091 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.67□□□□□ -0.38
FREM3P0C091 AC145285.5-201ENST00000562217 361 ntBASIC12.67□□□□□ -0.38
FREM3P0C091 AC135782.3-201ENST00000562782 2105 ntBASIC12.67□□□□□ -0.38
FREM3P0C091 NUDT4P2-201ENST00000578341 546 ntBASIC12.67□□□□□ -0.38
FREM3P0C091 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 U62317.3-201ENST00000608319 855 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms