Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.08□□□□□ -0.16
RFPL1O75677 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.08□□□□□ -0.16
RFPL1O75677 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.08□□□□□ -0.16
RFPL1O75677 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
RFPL1O75677 AP001505.2-201ENST00000616815 443 ntBASIC14.08□□□□□ -0.16
RFPL1O75677 AC091544.8-201ENST00000619490 361 ntBASIC14.08□□□□□ -0.16
RFPL1O75677 AC133540.1-201ENST00000620845 1019 ntBASIC14.08□□□□□ -0.16
RFPL1O75677 AL162426.1-201ENST00000624141 743 ntBASIC14.08□□□□□ -0.16
RFPL1O75677 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.08□□□□□ -0.16
RFPL1O75677 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.08□□□□□ -0.16
RFPL1O75677 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RFPL1O75677 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RFPL1O75677 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 ZNF493-208ENST00000599461 1769 ntBASIC14.08□□□□□ -0.16
RFPL1O75677 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 AP002353.1-201ENST00000528257 1599 ntBASIC14.08□□□□□ -0.16
RFPL1O75677 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 AL358781.1-202ENST00000321081 1360 ntBASIC14.08□□□□□ -0.16
RFPL1O75677 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFPL1O75677 CICP1-201ENST00000416803 2410 ntBASIC14.07□□□□□ -0.16
RFPL1O75677 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.07□□□□□ -0.16
RFPL1O75677 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.07□□□□□ -0.16
RFPL1O75677 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.07□□□□□ -0.16
RFPL1O75677 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RFPL1O75677 RPL13AP3-202ENST00000494676 1473 ntBASIC14.07□□□□□ -0.16
RFPL1O75677 Z98885.3-201ENST00000624882 1757 ntBASIC14.07□□□□□ -0.16
RFPL1O75677 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RFPL1O75677 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
RFPL1O75677 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 RN7SL720P-201ENST00000488178 304 ntBASIC14.07□□□□□ -0.16
RFPL1O75677 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.07□□□□□ -0.16
RFPL1O75677 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.07□□□□□ -0.16
RFPL1O75677 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.07□□□□□ -0.16
RFPL1O75677 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.07□□□□□ -0.16
RFPL1O75677 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.07□□□□□ -0.16
RFPL1O75677 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RFPL1O75677 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RFPL1O75677 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RFPL1O75677 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RFPL1O75677 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RFPL1O75677 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.07□□□□□ -0.16
RFPL1O75677 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFPL1O75677 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RFPL1O75677 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.07□□□□□ -0.16
RFPL1O75677 LINC01815-202ENST00000641468 1409 ntBASIC14.07□□□□□ -0.16
RFPL1O75677 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.07□□□□□ -0.16
RFPL1O75677 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFPL1O75677 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFPL1O75677 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.06□□□□□ -0.16
RFPL1O75677 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RFPL1O75677 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
RFPL1O75677 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.06□□□□□ -0.16
RFPL1O75677 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
RFPL1O75677 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFPL1O75677 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.06□□□□□ -0.16
RFPL1O75677 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
RFPL1O75677 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFPL1O75677 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RFPL1O75677 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.06□□□□□ -0.16
RFPL1O75677 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RFPL1O75677 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFPL1O75677 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFPL1O75677 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFPL1O75677 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RFPL1O75677 FXNP2-201ENST00000411625 547 ntBASIC14.06□□□□□ -0.16
RFPL1O75677 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.06□□□□□ -0.16
RFPL1O75677 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.06□□□□□ -0.16
RFPL1O75677 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RFPL1O75677 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFPL1O75677 AC012441.2-201ENST00000444843 739 ntBASIC14.06□□□□□ -0.16
RFPL1O75677 Z97180.1-201ENST00000445173 988 ntBASIC14.06□□□□□ -0.16
RFPL1O75677 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.06□□□□□ -0.16
RFPL1O75677 AC005740.2-201ENST00000511085 419 ntBASIC14.06□□□□□ -0.16
RFPL1O75677 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.06□□□□□ -0.16
RFPL1O75677 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms