Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 C1orf127-201ENST00000377004 2761 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 RAB29-202ENST00000367139 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 KPNA3-201ENST00000261667 4474 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 ATP6V1H-207ENST00000520188 1967 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AC139099.1-202ENST00000574098 2409 ntBASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 PLIN5-206ENST00000592610 1903 ntBASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 PIK3R5-218ENST00000611902 4339 ntTSL 5 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 MOV10-203ENST00000369645 3552 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
LINC01558Q9Y6Z2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
LINC01558Q9Y6Z2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
LINC01558Q9Y6Z2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
LINC01558Q9Y6Z2 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
LINC01558Q9Y6Z2 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.28
LINC01558Q9Y6Z2 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC7.09□□□□□ -1.28
LINC01558Q9Y6Z2 TRAP1-212ENST00000575671 2309 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
LINC01558Q9Y6Z2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
LINC01558Q9Y6Z2 LRRC37A7P-201ENST00000583900 2759 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 GSTM5-203ENST00000369813 4370 ntTSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 ABCD1-201ENST00000218104 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 ANKRD18CP-201ENST00000354752 2980 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 ELP2-201ENST00000350494 2487 ntTSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 UTP14A-201ENST00000394422 2488 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 NFASC-201ENST00000339876 10333 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 DUOXA1-208ENST00000558996 2684 ntTSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AC009060.1-202ENST00000502126 2242 ntTSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AL356234.1-201ENST00000404534 1779 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 CICP26-201ENST00000425003 2448 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 TMC3-201ENST00000359440 4641 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 ZNF619-204ENST00000447116 4153 ntAPPRIS P4 TSL 5 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AC092447.8-201ENST00000566570 4162 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 CSPG4P10-201ENST00000456932 4817 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 RBM10-203ENST00000377604 3747 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 NIN-201ENST00000245441 10293 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 SDCBP2-AS1-204ENST00000609470 2158 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 LINC02211-203ENST00000642022 2816 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 IL10RA-201ENST00000227752 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 LONP2-203ENST00000535754 2580 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 DDA1-201ENST00000359866 4078 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 DDX4-201ENST00000353507 2778 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 MED22-202ENST00000371999 987 ntTSL 3 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 INE1-201ENST00000456273 945 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AL359075.1-203ENST00000462729 1002 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AC004066.1-201ENST00000502488 802 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 SRP19-206ENST00000515463 660 ntTSL 3 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AC103988.2-201ENST00000561804 725 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 C2orf69P3-201ENST00000565542 1120 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AC104506.1-201ENST00000609247 429 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 REXO1L10P-201ENST00000615707 1290 ntBASIC7.08□□□□□ -1.28
LINC01558Q9Y6Z2 AL589182.2-201ENST00000619332 1049 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms