Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 HNRNPLP1-201ENST00000421896 1501 ntBASIC21.38■■□□□ 1.01
VPS8Q8N3P4 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 ASS1P2-201ENST00000439895 1223 ntBASIC21.38■■□□□ 1.01
VPS8Q8N3P4 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS8Q8N3P4 AC012358.2-201ENST00000430010 1434 ntBASIC21.37■■□□□ 1.01
VPS8Q8N3P4 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 AL445250.1-201ENST00000641671 2259 ntBASIC21.37■■□□□ 1.01
VPS8Q8N3P4 HLA-DMA-202ENST00000395303 1007 ntBASIC21.37■■□□□ 1.01
VPS8Q8N3P4 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 KRT18P66-201ENST00000452970 1269 ntBASIC21.37■■□□□ 1.01
VPS8Q8N3P4 TBC1D3P6-201ENST00000505954 962 ntBASIC21.37■■□□□ 1.01
VPS8Q8N3P4 AC106047.2-201ENST00000511723 743 ntBASIC21.37■■□□□ 1.01
VPS8Q8N3P4 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 AC011247.3-201ENST00000603297 438 ntBASIC21.37■■□□□ 1.01
VPS8Q8N3P4 AC113385.2-201ENST00000614465 762 ntBASIC21.37■■□□□ 1.01
VPS8Q8N3P4 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS8Q8N3P4 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 FKBP4P8-201ENST00000610931 1369 ntBASIC21.36■■□□□ 1.01
VPS8Q8N3P4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 ZNF436-AS1-201ENST00000335648 2547 ntBASIC21.36■■□□□ 1.01
VPS8Q8N3P4 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 AL355102.3-201ENST00000554299 1678 ntBASIC21.36■■□□□ 1.01
VPS8Q8N3P4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 AC114501.1-201ENST00000445949 172 ntBASIC21.36■■□□□ 1.01
VPS8Q8N3P4 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 AP000920.1-201ENST00000531824 344 ntBASIC21.36■■□□□ 1.01
VPS8Q8N3P4 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 AC010632.2-201ENST00000588369 1224 ntBASIC21.36■■□□□ 1.01
VPS8Q8N3P4 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 GDA-203ENST00000376986 1771 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS8Q8N3P4 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms