Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 AC087386.2-201ENST00000623212 4637 ntBASIC14.9□□□□□ -0.02
RNF135Q8IUD6 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 SNX15-201ENST00000352068 771 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 RPL3P5-201ENST00000441645 1232 ntBASIC14.9□□□□□ -0.02
RNF135Q8IUD6 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 AC008026.2-201ENST00000495438 348 ntBASIC14.9□□□□□ -0.02
RNF135Q8IUD6 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.9□□□□□ -0.02
RNF135Q8IUD6 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 AL590440.2-201ENST00000641973 1595 ntBASIC14.9□□□□□ -0.02
RNF135Q8IUD6 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 AL451000.1-201ENST00000451300 1186 ntBASIC14.89□□□□□ -0.03
RNF135Q8IUD6 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 TRMT112P3-201ENST00000580149 358 ntBASIC14.89□□□□□ -0.03
RNF135Q8IUD6 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF135Q8IUD6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms