Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CENPAP49450 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.84□□□□□ -0.35
CENPAP49450 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.84□□□□□ -0.35
CENPAP49450 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 RPL7P3-201ENST00000441388 714 ntBASIC12.84□□□□□ -0.35
CENPAP49450 CNN2P10-201ENST00000443067 918 ntBASIC12.84□□□□□ -0.35
CENPAP49450 CHMP1AP1-201ENST00000445563 662 ntBASIC12.84□□□□□ -0.35
CENPAP49450 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 CTBP2P5-201ENST00000454986 1264 ntBASIC12.84□□□□□ -0.35
CENPAP49450 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.84□□□□□ -0.35
CENPAP49450 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.84□□□□□ -0.35
CENPAP49450 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CENPAP49450 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 AC099521.2-201ENST00000619354 2036 ntBASIC12.84□□□□□ -0.35
CENPAP49450 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 AC005014.1-201ENST00000432006 2976 ntBASIC12.84□□□□□ -0.35
CENPAP49450 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.84□□□□□ -0.35
CENPAP49450 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CENPAP49450 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CENPAP49450 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CENPAP49450 REXO1L6P-201ENST00000603433 1515 ntBASIC12.83□□□□□ -0.35
CENPAP49450 TMBIM7P-202ENST00000641474 1516 ntBASIC12.83□□□□□ -0.35
CENPAP49450 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CENPAP49450 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.83□□□□□ -0.36
CENPAP49450 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.83□□□□□ -0.36
CENPAP49450 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.83□□□□□ -0.36
CENPAP49450 AC009474.1-201ENST00000455096 1565 ntBASIC12.83□□□□□ -0.36
CENPAP49450 AC105206.1-202ENST00000314927 2368 ntBASIC12.83□□□□□ -0.36
CENPAP49450 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CENPAP49450 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.83□□□□□ -0.36
CENPAP49450 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 AL391647.1-201ENST00000395664 511 ntBASIC12.83□□□□□ -0.36
CENPAP49450 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CENPAP49450 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.83□□□□□ -0.36
CENPAP49450 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.83□□□□□ -0.36
CENPAP49450 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.83□□□□□ -0.36
CENPAP49450 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.83□□□□□ -0.36
CENPAP49450 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CENPAP49450 AC100827.2-201ENST00000563214 1194 ntBASIC12.83□□□□□ -0.36
CENPAP49450 DUX4L46-201ENST00000566845 751 ntBASIC12.83□□□□□ -0.36
CENPAP49450 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.83□□□□□ -0.36
CENPAP49450 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.83□□□□□ -0.36
CENPAP49450 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.83□□□□□ -0.36
CENPAP49450 MIR6720-201ENST00000611664 98 ntBASIC12.83□□□□□ -0.36
CENPAP49450 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CENPAP49450 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.83□□□□□ -0.36
CENPAP49450 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.83□□□□□ -0.36
CENPAP49450 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms