Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 AC040160.2-201ENST00000623816 1675 ntBASIC5.99□□□□□ -1.45
USH2AO75445 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 AC126365.1-201ENST00000578585 1514 ntBASIC5.99□□□□□ -1.45
USH2AO75445 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC5.99□□□□□ -1.45
USH2AO75445 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 AC011294.1-201ENST00000487094 844 ntTSL 3 BASIC5.99□□□□□ -1.45
USH2AO75445 AC092471.1-201ENST00000536497 572 ntTSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC5.99□□□□□ -1.45
USH2AO75445 HP-215ENST00000569639 568 ntTSL 4 BASIC5.99□□□□□ -1.45
USH2AO75445 AC003005.2-201ENST00000595422 539 ntTSL 4 BASIC5.99□□□□□ -1.45
USH2AO75445 AC010326.4-201ENST00000604665 891 ntBASIC5.99□□□□□ -1.45
USH2AO75445 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 BX640514.1-201ENST00000583223 1918 ntBASIC5.98□□□□□ -1.45
USH2AO75445 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
USH2AO75445 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
USH2AO75445 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 AC020658.6-201ENST00000623564 1870 ntBASIC5.98□□□□□ -1.45
USH2AO75445 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 AC024475.2-201ENST00000312173 879 ntBASIC5.98□□□□□ -1.45
USH2AO75445 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC5.98□□□□□ -1.45
USH2AO75445 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 AL356488.1-201ENST00000429752 609 ntBASIC5.98□□□□□ -1.45
USH2AO75445 TXNDC9-205ENST00000434323 733 ntTSL 5 BASIC5.98□□□□□ -1.45
USH2AO75445 RN7SL225P-201ENST00000464648 298 ntBASIC5.98□□□□□ -1.45
USH2AO75445 TSACC-206ENST00000466306 477 ntTSL 3 BASIC5.98□□□□□ -1.45
USH2AO75445 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC5.98□□□□□ -1.45
USH2AO75445 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 AP003717.2-201ENST00000534962 898 ntBASIC5.98□□□□□ -1.45
USH2AO75445 AC093802.2-201ENST00000567853 583 ntBASIC5.98□□□□□ -1.45
USH2AO75445 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC5.98□□□□□ -1.45
USH2AO75445 AC106774.4-201ENST00000600799 409 ntBASIC5.98□□□□□ -1.45
USH2AO75445 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC5.98□□□□□ -1.45
USH2AO75445 RN7SL341P-201ENST00000613745 298 ntBASIC5.98□□□□□ -1.45
USH2AO75445 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
USH2AO75445 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 LINC00552-201ENST00000625151 2579 ntBASIC5.98□□□□□ -1.45
USH2AO75445 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
USH2AO75445 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC5.98□□□□□ -1.45
USH2AO75445 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 TMIGD1-201ENST00000328886 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 KRTAP12-4-201ENST00000391618 447 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
USH2AO75445 RBM14-203ENST00000409372 876 ntTSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 TEDDM2P-201ENST00000414169 786 ntBASIC5.98□□□□□ -1.45
USH2AO75445 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 AL138902.1-201ENST00000437965 856 ntTSL 3 BASIC5.98□□□□□ -1.45
USH2AO75445 AC113346.2-201ENST00000502684 457 ntTSL 5 BASIC5.98□□□□□ -1.45
USH2AO75445 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 DIO2-206ENST00000555750 1049 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 AC007378.1-201ENST00000609765 478 ntBASIC5.98□□□□□ -1.45
USH2AO75445 TNNT3-216ENST00000641119 941 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
USH2AO75445 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC5.98□□□□□ -1.45
USH2AO75445 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 AC013268.4-201ENST00000637413 2228 ntBASIC5.98□□□□□ -1.45
USH2AO75445 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC5.98□□□□□ -1.45
USH2AO75445 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC5.98□□□□□ -1.45
USH2AO75445 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 ABR-228ENST00000574437 3196 ntTSL 5 BASIC5.98□□□□□ -1.45
USH2AO75445 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USH2AO75445 CCDC148-203ENST00000409889 1160 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms