Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC11.38□□□□□ -0.59
LMO4P61968 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
LMO4P61968 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC11.38□□□□□ -0.59
LMO4P61968 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC11.38□□□□□ -0.59
LMO4P61968 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC11.38□□□□□ -0.59
LMO4P61968 AC068831.5-201ENST00000557387 328 ntBASIC11.38□□□□□ -0.59
LMO4P61968 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC11.38□□□□□ -0.59
LMO4P61968 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC11.38□□□□□ -0.59
LMO4P61968 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
LMO4P61968 AC006548.2-201ENST00000605217 529 ntBASIC11.38□□□□□ -0.59
LMO4P61968 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC11.38□□□□□ -0.59
LMO4P61968 AC005274.1-201ENST00000623460 802 ntBASIC11.38□□□□□ -0.59
LMO4P61968 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC11.38□□□□□ -0.59
LMO4P61968 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
LMO4P61968 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.38□□□□□ -0.59
LMO4P61968 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.38□□□□□ -0.59
LMO4P61968 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 AC020763.3-201ENST00000625095 2904 ntBASIC11.38□□□□□ -0.59
LMO4P61968 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
LMO4P61968 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LMO4P61968 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
LMO4P61968 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
LMO4P61968 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LMO4P61968 AC005089.1-201ENST00000619486 2241 ntBASIC11.37□□□□□ -0.59
LMO4P61968 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LMO4P61968 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.37□□□□□ -0.59
LMO4P61968 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
LMO4P61968 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.37□□□□□ -0.59
LMO4P61968 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC11.37□□□□□ -0.59
LMO4P61968 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LMO4P61968 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.37□□□□□ -0.59
LMO4P61968 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LMO4P61968 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LMO4P61968 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
LMO4P61968 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC11.37□□□□□ -0.59
LMO4P61968 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC11.37□□□□□ -0.59
LMO4P61968 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC11.37□□□□□ -0.59
LMO4P61968 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC11.37□□□□□ -0.59
LMO4P61968 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC11.37□□□□□ -0.59
LMO4P61968 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC11.37□□□□□ -0.59
LMO4P61968 AC244197.1-201ENST00000456494 951 ntBASIC11.37□□□□□ -0.59
LMO4P61968 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC11.37□□□□□ -0.59
LMO4P61968 AC104212.2-201ENST00000478813 628 ntBASIC11.37□□□□□ -0.59
LMO4P61968 TBC1D3P6-201ENST00000505954 962 ntBASIC11.37□□□□□ -0.59
LMO4P61968 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC11.37□□□□□ -0.59
LMO4P61968 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
LMO4P61968 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC11.37□□□□□ -0.59
LMO4P61968 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC11.37□□□□□ -0.59
LMO4P61968 DNM1P51-201ENST00000558149 522 ntBASIC11.37□□□□□ -0.59
LMO4P61968 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC11.37□□□□□ -0.59
LMO4P61968 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC11.37□□□□□ -0.59
LMO4P61968 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC11.37□□□□□ -0.59
LMO4P61968 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC11.37□□□□□ -0.59
LMO4P61968 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC11.37□□□□□ -0.59
LMO4P61968 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.37□□□□□ -0.59
LMO4P61968 AC026336.4-201ENST00000624565 1050 ntBASIC11.37□□□□□ -0.59
LMO4P61968 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC11.37□□□□□ -0.59
LMO4P61968 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC11.37□□□□□ -0.59
LMO4P61968 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC11.37□□□□□ -0.59
LMO4P61968 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LMO4P61968 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LMO4P61968 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LMO4P61968 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC11.37□□□□□ -0.59
LMO4P61968 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
LMO4P61968 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
LMO4P61968 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11.37□□□□□ -0.59
LMO4P61968 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
LMO4P61968 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms