Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC8.32□□□□□ -1.08
APOBP04114 AC020893.2-201ENST00000506083 723 ntBASIC8.32□□□□□ -1.08
APOBP04114 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC8.32□□□□□ -1.08
APOBP04114 MYL6-210ENST00000548400 573 ntTSL 3 BASIC8.32□□□□□ -1.08
APOBP04114 MIR4763-201ENST00000581461 92 ntBASIC8.32□□□□□ -1.08
APOBP04114 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC8.32□□□□□ -1.08
APOBP04114 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC8.32□□□□□ -1.08
APOBP04114 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 AC007336.3-201ENST00000623886 2160 ntBASIC8.32□□□□□ -1.08
APOBP04114 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
APOBP04114 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
APOBP04114 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
APOBP04114 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC8.31□□□□□ -1.08
APOBP04114 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 AC073488.1-201ENST00000416620 1600 ntBASIC8.31□□□□□ -1.08
APOBP04114 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC8.31□□□□□ -1.08
APOBP04114 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
APOBP04114 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC8.31□□□□□ -1.08
APOBP04114 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 OR7E122P-201ENST00000383606 1017 ntBASIC8.31□□□□□ -1.08
APOBP04114 MIR602-201ENST00000384960 98 ntBASIC8.31□□□□□ -1.08
APOBP04114 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC8.31□□□□□ -1.08
APOBP04114 HNRNPA1P4-201ENST00000509706 756 ntBASIC8.31□□□□□ -1.08
APOBP04114 SLC25A5P6-201ENST00000515328 886 ntBASIC8.31□□□□□ -1.08
APOBP04114 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC8.31□□□□□ -1.08
APOBP04114 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC8.31□□□□□ -1.08
APOBP04114 Metazoa_SRP.198-201ENST00000610617 323 ntBASIC8.31□□□□□ -1.08
APOBP04114 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC8.31□□□□□ -1.08
APOBP04114 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
APOBP04114 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC8.31□□□□□ -1.08
APOBP04114 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC8.31□□□□□ -1.08
APOBP04114 GOLGA8EP-201ENST00000530246 1959 ntBASIC8.31□□□□□ -1.08
APOBP04114 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC8.31□□□□□ -1.08
APOBP04114 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC8.31□□□□□ -1.08
APOBP04114 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC8.31□□□□□ -1.08
APOBP04114 TRBV22-1-201ENST00000424543 337 ntBASIC8.31□□□□□ -1.08
APOBP04114 AL049792.1-201ENST00000424708 1262 ntBASIC8.31□□□□□ -1.08
APOBP04114 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
APOBP04114 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC8.31□□□□□ -1.08
APOBP04114 MTND6P7-201ENST00000433237 524 ntBASIC8.31□□□□□ -1.08
APOBP04114 AC139143.1-201ENST00000441772 1207 ntBASIC8.31□□□□□ -1.08
APOBP04114 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 OARD1-214ENST00000486443 764 ntTSL 3 BASIC8.31□□□□□ -1.08
APOBP04114 RPL18P1-201ENST00000497218 552 ntBASIC8.31□□□□□ -1.08
APOBP04114 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC8.31□□□□□ -1.08
APOBP04114 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC8.31□□□□□ -1.08
APOBP04114 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
APOBP04114 DDC-213ENST00000617822 1809 ntTSL 3 BASIC8.31□□□□□ -1.08
APOBP04114 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC8.31□□□□□ -1.08
APOBP04114 AC025538.1-201ENST00000510707 1486 ntBASIC8.31□□□□□ -1.08
APOBP04114 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
APOBP04114 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC8.31□□□□□ -1.08
APOBP04114 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 RN7SL483P-201ENST00000478417 285 ntBASIC8.31□□□□□ -1.08
APOBP04114 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC8.31□□□□□ -1.08
APOBP04114 HINT1-208ENST00000513012 583 ntTSL 4 BASIC8.31□□□□□ -1.08
APOBP04114 FAM86B1-215ENST00000533513 725 ntTSL 5 BASIC8.31□□□□□ -1.08
APOBP04114 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC8.31□□□□□ -1.08
APOBP04114 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC8.31□□□□□ -1.08
APOBP04114 AC078880.3-201ENST00000603439 1121 ntBASIC8.31□□□□□ -1.08
APOBP04114 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC8.31□□□□□ -1.08
APOBP04114 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
APOBP04114 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC8.31□□□□□ -1.08
APOBP04114 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
APOBP04114 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
APOBP04114 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
APOBP04114 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
APOBP04114 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC8.31□□□□□ -1.08
APOBP04114 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms