Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.75■□□□□ 0.43
CHL1O00533 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.75■□□□□ 0.43
CHL1O00533 AC126755.5-201ENST00000622756 267 ntBASIC17.75■□□□□ 0.43
CHL1O00533 AC011471.3-201ENST00000623576 402 ntBASIC17.75■□□□□ 0.43
CHL1O00533 AQP7P3-201ENST00000624547 1041 ntBASIC17.75■□□□□ 0.43
CHL1O00533 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHL1O00533 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHL1O00533 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHL1O00533 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHL1O00533 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC17.75■□□□□ 0.43
CHL1O00533 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHL1O00533 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHL1O00533 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHL1O00533 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHL1O00533 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHL1O00533 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
CHL1O00533 AC005014.1-201ENST00000432006 2976 ntBASIC17.75■□□□□ 0.43
CHL1O00533 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CHL1O00533 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC17.75■□□□□ 0.43
CHL1O00533 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHL1O00533 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CHL1O00533 STK25-235ENST00000543554 2556 ntTSL 2 BASIC17.75■□□□□ 0.43
CHL1O00533 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHL1O00533 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHL1O00533 AL672207.1-201ENST00000328462 1570 ntBASIC17.74■□□□□ 0.43
CHL1O00533 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHL1O00533 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHL1O00533 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC17.74■□□□□ 0.43
CHL1O00533 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHL1O00533 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CHL1O00533 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.74■□□□□ 0.43
CHL1O00533 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 AC103563.1-201ENST00000429316 123 ntBASIC17.74■□□□□ 0.43
CHL1O00533 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.74■□□□□ 0.43
CHL1O00533 AC008026.2-201ENST00000495438 348 ntBASIC17.74■□□□□ 0.43
CHL1O00533 SAA2-206ENST00000530400 323 ntTSL 3 BASIC17.74■□□□□ 0.43
CHL1O00533 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC17.74■□□□□ 0.43
CHL1O00533 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC17.74■□□□□ 0.43
CHL1O00533 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.74■□□□□ 0.43
CHL1O00533 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC17.74■□□□□ 0.43
CHL1O00533 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC17.74■□□□□ 0.43
CHL1O00533 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.74■□□□□ 0.43
CHL1O00533 AC127024.7-201ENST00000625101 200 ntBASIC17.74■□□□□ 0.43
CHL1O00533 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC17.74■□□□□ 0.43
CHL1O00533 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC17.74■□□□□ 0.43
CHL1O00533 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC17.74■□□□□ 0.43
CHL1O00533 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.74■□□□□ 0.43
CHL1O00533 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.74■□□□□ 0.43
CHL1O00533 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.74■□□□□ 0.43
CHL1O00533 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CHL1O00533 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHL1O00533 DDC-212ENST00000615193 1674 ntTSL 3 BASIC17.74■□□□□ 0.43
CHL1O00533 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CHL1O00533 EML1-203ENST00000334192 4064 ntTSL 5 BASIC17.73■□□□□ 0.43
CHL1O00533 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
CHL1O00533 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.73■□□□□ 0.43
CHL1O00533 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CHL1O00533 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC17.73■□□□□ 0.43
CHL1O00533 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.73■□□□□ 0.43
CHL1O00533 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.73■□□□□ 0.43
CHL1O00533 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.73■□□□□ 0.43
CHL1O00533 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.73■□□□□ 0.43
CHL1O00533 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 AC006158.1-201ENST00000610661 249 ntBASIC17.73■□□□□ 0.43
CHL1O00533 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.73■□□□□ 0.43
CHL1O00533 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHL1O00533 KRT8P42-201ENST00000405771 1399 ntBASIC17.73■□□□□ 0.43
CHL1O00533 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.73■□□□□ 0.43
CHL1O00533 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.73■□□□□ 0.43
CHL1O00533 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.73■□□□□ 0.43
CHL1O00533 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms