Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 AL357373.1-201ENST00000394974 322 ntBASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 AC092570.1-201ENST00000414446 469 ntBASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 AC023968.2-201ENST00000560593 1049 ntBASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 AC027139.1-201ENST00000565286 951 ntBASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 DGAT2L7P-201ENST00000602462 744 ntBASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 URAHP-205ENST00000610227 398 ntBASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 CSTP2-201ENST00000610599 398 ntBASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 AL627230.2-201ENST00000613254 655 ntBASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 AC068760.1-201ENST00000493579 1953 ntBASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 AC092115.1-201ENST00000566277 1402 ntBASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 NALT1-202ENST00000450304 437 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 GULOP-201ENST00000454030 748 ntBASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 TBC1D3P6-201ENST00000505954 962 ntBASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 AC078814.4-201ENST00000546650 327 ntBASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC187A0A096LP49 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms