Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 EIF3LP1-201ENST00000554099 1658 ntBASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 JPX-207ENST00000602772 1692 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 AL078621.2-201ENST00000419351 698 ntBASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 AC005838.1-201ENST00000430712 233 ntBASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 POLR2H-205ENST00000443489 807 ntTSL 2 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 AC092471.1-201ENST00000536497 572 ntTSL 5 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 FGF11-205ENST00000575398 990 ntTSL 2 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 AC010271.2-201ENST00000614440 588 ntBASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 MFSD12-215ENST00000615613 688 ntBASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 ABHD11-AS1-202ENST00000641969 358 ntBASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RIMBP3Q9UFD9 LTB4R2-202ENST00000528054 3092 ntBASIC20.95■□□□□ 0.95
RIMBP3Q9UFD9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 VRK3-202ENST00000377011 1749 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 AL356481.1-201ENST00000434999 578 ntTSL 5 BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 AC245884.7-201ENST00000514037 356 ntBASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 RN7SKP195-201ENST00000516587 303 ntBASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 AL160313.2-201ENST00000555875 493 ntTSL 3 BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 AC079779.3-227ENST00000591927 860 ntTSL 5 BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 AC026401.3-201ENST00000624682 882 ntBASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 AC127526.5-201ENST00000637148 1110 ntBASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 FAM183BP-201ENST00000409072 1595 ntBASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 ERG-211ENST00000453032 1595 ntTSL 2 BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RIMBP3Q9UFD9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 GHRL-201ENST00000287656 1313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 GNAS-209ENST00000371081 730 ntTSL 2 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 IGKV2D-26-201ENST00000390268 390 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 CYTH4-202ENST00000402997 633 ntTSL 4 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 AC099541.1-201ENST00000453828 670 ntTSL 2 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 WASH6P-207ENST00000476066 720 ntTSL 5 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 MGC32805-201ENST00000503529 579 ntTSL 3 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 AC008514.1-203ENST00000518172 574 ntTSL 4 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 AL133297.2-201ENST00000563162 485 ntTSL 2 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 AC012146.4-201ENST00000575546 271 ntBASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 IGKV1D-13-201ENST00000611391 376 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 AL031430.1-201ENST00000642067 1039 ntBASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 NAA50-203ENST00000477813 1945 ntTSL 5 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIMBP3Q9UFD9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 PRAMENP-203ENST00000548391 1445 ntBASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 SMUG1-201ENST00000243112 627 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 AL157414.1-201ENST00000366097 770 ntTSL 3 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 EXOSC1-204ENST00000370902 923 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 IL32-204ENST00000396887 789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 AC245128.2-201ENST00000412970 284 ntBASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 TBC1D21-203ENST00000562056 965 ntTSL 5 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 MIR7-3HG-204ENST00000588758 865 ntTSL 3 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 AC087893.1-201ENST00000612818 664 ntBASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 AC109635.4-201ENST00000636653 1005 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 AC084337.2-202ENST00000640959 595 ntAPPRIS P5 TSL 4 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms