Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 AL031058.1-201ENST00000561592 888 ntBASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 AC022966.2-201ENST00000587434 367 ntBASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
COL22A1Q8NFW1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 DNM1P50-201ENST00000565767 508 ntBASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 WSB1-213ENST00000583193 552 ntTSL 4 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 AC005336.1-201ENST00000585431 1243 ntBASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 SARS2-211ENST00000598831 665 ntTSL 5 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 AC025165.4-201ENST00000602327 433 ntBASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.81■□□□□ 0.44
COL22A1Q8NFW1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 C1orf158-201ENST00000376210 695 ntTSL 3 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AP003170.2-201ENST00000544730 786 ntBASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 MT1G-204ENST00000569500 305 ntTSL 3 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AL353997.3-201ENST00000586597 589 ntBASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AL137028.1-201ENST00000620521 555 ntBASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AC130469.2-201ENST00000625112 1092 ntBASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AC132872.4-202ENST00000622924 2756 ntBASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AC091807.1-201ENST00000418838 1544 ntBASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AC099689.1-201ENST00000624383 1302 ntBASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 OR4C3-202ENST00000611380 597 ntBASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 AC080038.2-201ENST00000617734 423 ntBASIC17.8■□□□□ 0.44
COL22A1Q8NFW1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
COL22A1Q8NFW1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
COL22A1Q8NFW1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms