Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 AC074138.1-201ENST00000611182 1303 ntBASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 LINC01165-201ENST00000445190 1623 ntBASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 RNU6-673P-201ENST00000365084 104 ntBASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 AC240504.1-201ENST00000395709 845 ntBASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 RPL7P35-201ENST00000446943 740 ntBASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 RN7SL530P-201ENST00000485097 298 ntBASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 AC005014.3-201ENST00000605985 190 ntBASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 AC073352.2-201ENST00000609385 439 ntBASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 AC008147.4-201ENST00000617570 1204 ntBASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 AL805961.1-201ENST00000642026 753 ntBASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNYL3P0C7X3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 KRT8P28-201ENST00000433288 1390 ntBASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 AL590440.2-201ENST00000641973 1595 ntBASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 RN7SKP199-201ENST00000410325 305 ntBASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 KRT18P36-201ENST00000411618 1276 ntBASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 RPS9P1-201ENST00000419943 583 ntBASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 RPSAP15-201ENST00000448168 861 ntBASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 RN7SL181P-201ENST00000462921 277 ntBASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 AC122134.1-202ENST00000569111 1201 ntBASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 PHBP15-201ENST00000574228 665 ntBASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 AC007718.1-201ENST00000621078 280 ntBASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CCNYL3P0C7X3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms