Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NKX2-2O95096 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 OR2K2-202ENST00000374428 1038 ntBASIC12.92□□□□□ -0.34
NKX2-2O95096 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 AC005722.1-201ENST00000431878 964 ntBASIC12.92□□□□□ -0.34
NKX2-2O95096 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 RN7SL788P-201ENST00000460504 316 ntBASIC12.92□□□□□ -0.34
NKX2-2O95096 RPL18AP8-201ENST00000486071 528 ntBASIC12.92□□□□□ -0.34
NKX2-2O95096 NUP210P1-202ENST00000504322 710 ntBASIC12.92□□□□□ -0.34
NKX2-2O95096 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.92□□□□□ -0.34
NKX2-2O95096 COQ10BP2-201ENST00000513804 724 ntBASIC12.92□□□□□ -0.34
NKX2-2O95096 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.92□□□□□ -0.34
NKX2-2O95096 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 RN7SL574P-201ENST00000581512 297 ntBASIC12.92□□□□□ -0.34
NKX2-2O95096 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
NKX2-2O95096 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.92□□□□□ -0.34
NKX2-2O95096 AC009560.1-201ENST00000620208 434 ntBASIC12.92□□□□□ -0.34
NKX2-2O95096 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-2O95096 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-2O95096 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 LINC00638-201ENST00000555578 2518 ntBASIC12.92□□□□□ -0.34
NKX2-2O95096 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 AC020763.3-201ENST00000625095 2904 ntBASIC12.92□□□□□ -0.34
NKX2-2O95096 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
NKX2-2O95096 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.91□□□□□ -0.34
NKX2-2O95096 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.91□□□□□ -0.34
NKX2-2O95096 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NKX2-2O95096 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 AC004623.1-201ENST00000624592 2127 ntBASIC12.91□□□□□ -0.34
NKX2-2O95096 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.91□□□□□ -0.34
NKX2-2O95096 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NKX2-2O95096 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.91□□□□□ -0.34
NKX2-2O95096 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.91□□□□□ -0.34
NKX2-2O95096 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.91□□□□□ -0.34
NKX2-2O95096 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
NKX2-2O95096 AL583805.1-201ENST00000391389 531 ntBASIC12.91□□□□□ -0.34
NKX2-2O95096 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.91□□□□□ -0.34
NKX2-2O95096 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.91□□□□□ -0.34
NKX2-2O95096 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.91□□□□□ -0.34
NKX2-2O95096 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.91□□□□□ -0.34
NKX2-2O95096 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.91□□□□□ -0.34
NKX2-2O95096 AP000358.1-201ENST00000456260 156 ntBASIC12.91□□□□□ -0.34
NKX2-2O95096 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.91□□□□□ -0.34
NKX2-2O95096 RN7SL67P-201ENST00000492147 296 ntBASIC12.91□□□□□ -0.34
NKX2-2O95096 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.91□□□□□ -0.34
NKX2-2O95096 RTN3P1-201ENST00000536295 711 ntBASIC12.91□□□□□ -0.34
NKX2-2O95096 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.91□□□□□ -0.34
NKX2-2O95096 MIR3677-201ENST00000578964 60 ntBASIC12.91□□□□□ -0.34
NKX2-2O95096 MIR3940-201ENST00000579148 102 ntBASIC12.91□□□□□ -0.34
NKX2-2O95096 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.91□□□□□ -0.34
NKX2-2O95096 SIGLEC18P-201ENST00000602271 909 ntBASIC12.91□□□□□ -0.34
NKX2-2O95096 AC007326.1-201ENST00000604539 458 ntBASIC12.91□□□□□ -0.34
NKX2-2O95096 AF254983.2-201ENST00000612331 135 ntBASIC12.91□□□□□ -0.34
NKX2-2O95096 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.91□□□□□ -0.34
NKX2-2O95096 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.91□□□□□ -0.34
NKX2-2O95096 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.91□□□□□ -0.34
NKX2-2O95096 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms