Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC11.3□□□□□ -0.6
UPK2O00526 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.3□□□□□ -0.6
UPK2O00526 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
UPK2O00526 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK2O00526 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 RAN-210ENST00000541630 1475 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK2O00526 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
UPK2O00526 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC11.3□□□□□ -0.6
UPK2O00526 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.3□□□□□ -0.6
UPK2O00526 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC11.3□□□□□ -0.6
UPK2O00526 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
UPK2O00526 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
UPK2O00526 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.29□□□□□ -0.6
UPK2O00526 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
UPK2O00526 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.29□□□□□ -0.6
UPK2O00526 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 ZNF493-208ENST00000599461 1769 ntBASIC11.29□□□□□ -0.6
UPK2O00526 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
UPK2O00526 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UPK2O00526 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 FAM21FP-201ENST00000426241 1131 ntBASIC11.29□□□□□ -0.6
UPK2O00526 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC11.29□□□□□ -0.6
UPK2O00526 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC11.29□□□□□ -0.6
UPK2O00526 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC11.29□□□□□ -0.6
UPK2O00526 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC11.29□□□□□ -0.6
UPK2O00526 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC11.29□□□□□ -0.6
UPK2O00526 U91328.1-201ENST00000437528 223 ntBASIC11.29□□□□□ -0.6
UPK2O00526 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
UPK2O00526 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UPK2O00526 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC11.29□□□□□ -0.6
UPK2O00526 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC11.29□□□□□ -0.6
UPK2O00526 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC11.29□□□□□ -0.6
UPK2O00526 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
UPK2O00526 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC11.29□□□□□ -0.6
UPK2O00526 AP005482.1-201ENST00000563722 1273 ntBASIC11.29□□□□□ -0.6
UPK2O00526 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC11.29□□□□□ -0.6
UPK2O00526 RN7SL163P-201ENST00000583100 276 ntBASIC11.29□□□□□ -0.6
UPK2O00526 AC133552.6-201ENST00000613406 534 ntBASIC11.29□□□□□ -0.6
UPK2O00526 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC11.29□□□□□ -0.6
UPK2O00526 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
UPK2O00526 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 AC093462.1-201ENST00000621167 1683 ntBASIC11.29□□□□□ -0.6
UPK2O00526 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
UPK2O00526 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.29□□□□□ -0.6
UPK2O00526 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK2O00526 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms