Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 AC112492.5-201ENST00000421897 457 ntBASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 AC234783.1-201ENST00000441761 496 ntBASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 RN7SL713P-201ENST00000582127 302 ntBASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PFDN4Q9NQP4 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 AL590824.1-201ENST00000403828 1349 ntBASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 KRT18P15-201ENST00000458108 1291 ntBASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 AC078819.1-201ENST00000547454 765 ntBASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 AC012085.1-201ENST00000548270 765 ntBASIC13.97□□□□□ -0.17
PFDN4Q9NQP4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms