Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 MICA-210ENST00000616296 2260 ntTSL 5 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 CYP4F23P-201ENST00000593402 1579 ntBASIC15.7■□□□□ 0.1
CBX8Q9HC52 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX8Q9HC52 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CBX8Q9HC52 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CBX8Q9HC52 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC15.69■□□□□ 0.1
CBX8Q9HC52 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.69■□□□□ 0.1
CBX8Q9HC52 CNN2P8-201ENST00000421872 913 ntBASIC15.69■□□□□ 0.1
CBX8Q9HC52 AC112492.5-201ENST00000421897 457 ntBASIC15.69■□□□□ 0.1
CBX8Q9HC52 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC15.69■□□□□ 0.1
CBX8Q9HC52 BCRP2-202ENST00000447763 634 ntBASIC15.69■□□□□ 0.1
CBX8Q9HC52 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX8Q9HC52 FTH1P14-201ENST00000482930 551 ntBASIC15.69■□□□□ 0.1
CBX8Q9HC52 BCRP6-201ENST00000510112 632 ntBASIC15.69■□□□□ 0.1
CBX8Q9HC52 BCRP7-201ENST00000511549 544 ntBASIC15.69■□□□□ 0.1
CBX8Q9HC52 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 PGAM1P5-201ENST00000548011 764 ntBASIC15.69■□□□□ 0.1
CBX8Q9HC52 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.69■□□□□ 0.1
CBX8Q9HC52 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.69■□□□□ 0.1
CBX8Q9HC52 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX8Q9HC52 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX8Q9HC52 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 AC110048.1-201ENST00000604293 2157 ntBASIC15.69■□□□□ 0.1
CBX8Q9HC52 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CBX8Q9HC52 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX8Q9HC52 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX8Q9HC52 PPP1R26P2-201ENST00000611403 3595 ntBASIC15.69■□□□□ 0.1
CBX8Q9HC52 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 FAM207CP-201ENST00000443486 507 ntBASIC15.68■□□□□ 0.1
CBX8Q9HC52 KRT17P7-201ENST00000451704 1104 ntBASIC15.68■□□□□ 0.1
CBX8Q9HC52 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 TP53TG3HP-202ENST00000569755 579 ntBASIC15.68■□□□□ 0.1
CBX8Q9HC52 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
CBX8Q9HC52 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CBX8Q9HC52 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms