Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 KRT18P8-201ENST00000581937 1246 ntBASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 AC009884.2-201ENST00000603110 324 ntBASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 AP001972.5-201ENST00000624624 2338 ntBASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 CCT8L1P-201ENST00000465400 1674 ntBASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC50Q8IVM0 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC50Q8IVM0 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.96□□□□□ -0.02
CCDC50Q8IVM0 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC50Q8IVM0 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.96□□□□□ -0.02
CCDC50Q8IVM0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CCDC50Q8IVM0 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC50Q8IVM0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 BOLA2P3-201ENST00000404566 256 ntBASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 AC005962.1-201ENST00000584100 773 ntBASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC50Q8IVM0 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 AC106818.1-201ENST00000623223 3242 ntBASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 OR2I1P-208ENST00000641137 4948 ntBASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 AC079178.1-201ENST00000420915 656 ntBASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 KLF2P1-201ENST00000447438 1042 ntBASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms