Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 AL845472.1-202ENST00000624675 4080 ntBASIC13.27□□□□□ -0.29
LPCAT4Q643R3 LINC02228-202ENST00000641261 2489 ntBASIC13.27□□□□□ -0.29
LPCAT4Q643R3 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 FKBP4P6-201ENST00000457486 1332 ntBASIC13.26□□□□□ -0.29
LPCAT4Q643R3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 MESTP3-201ENST00000503460 968 ntBASIC13.26□□□□□ -0.29
LPCAT4Q643R3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.26□□□□□ -0.29
LPCAT4Q643R3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 MIR3687-2-201ENST00000577708 61 ntBASIC13.26□□□□□ -0.29
LPCAT4Q643R3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 MIR3687-1-201ENST00000614492 61 ntBASIC13.26□□□□□ -0.29
LPCAT4Q643R3 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LPCAT4Q643R3 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 AC087164.2-201ENST00000624514 3130 ntBASIC13.25□□□□□ -0.29
LPCAT4Q643R3 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 AC112176.1-201ENST00000565428 3024 ntBASIC13.25□□□□□ -0.29
LPCAT4Q643R3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.25□□□□□ -0.29
LPCAT4Q643R3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms