Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 FKBP4P8-201ENST00000610931 1369 ntBASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 ABCD1P4-201ENST00000399687 604 ntBASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 AL080243.1-201ENST00000423293 1060 ntBASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 AC061965.1-201ENST00000560524 1465 ntBASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 MIR1301-201ENST00000408518 82 ntBASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 ACTBP14-201ENST00000411655 1089 ntBASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 HLA-DPA2-205ENST00000433582 733 ntBASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 RN7SL147P-201ENST00000487345 298 ntBASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 HNRNPA1P56-201ENST00000505767 954 ntBASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 ESR1-214ENST00000638569 132 ntTSL 5 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 AC092115.1-201ENST00000566277 1402 ntBASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 AC040160.2-201ENST00000623816 1675 ntBASIC16.18■□□□□ 0.18
SHROOM1Q2M3G4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms