Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CXCR4P61073 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CXCR4P61073 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CXCR4P61073 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CXCR4P61073 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.84□□□□□ -0.35
CXCR4P61073 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CXCR4P61073 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CXCR4P61073 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.83□□□□□ -0.35
CXCR4P61073 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.83□□□□□ -0.35
CXCR4P61073 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CXCR4P61073 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.83□□□□□ -0.35
CXCR4P61073 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC12.83□□□□□ -0.35
CXCR4P61073 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CXCR4P61073 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.83□□□□□ -0.36
CXCR4P61073 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CXCR4P61073 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CXCR4P61073 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.83□□□□□ -0.36
CXCR4P61073 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.83□□□□□ -0.36
CXCR4P61073 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.83□□□□□ -0.36
CXCR4P61073 PMS2P2-201ENST00000425039 1128 ntBASIC12.83□□□□□ -0.36
CXCR4P61073 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.83□□□□□ -0.36
CXCR4P61073 AC106760.1-201ENST00000508690 800 ntBASIC12.83□□□□□ -0.36
CXCR4P61073 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.83□□□□□ -0.36
CXCR4P61073 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.83□□□□□ -0.36
CXCR4P61073 MIR5189-201ENST00000577370 114 ntBASIC12.83□□□□□ -0.36
CXCR4P61073 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.83□□□□□ -0.36
CXCR4P61073 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.83□□□□□ -0.36
CXCR4P61073 OR10B1P-201ENST00000601666 907 ntBASIC12.83□□□□□ -0.36
CXCR4P61073 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.83□□□□□ -0.36
CXCR4P61073 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.83□□□□□ -0.36
CXCR4P61073 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.83□□□□□ -0.36
CXCR4P61073 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 FMO6P-201ENST00000236166 1620 ntBASIC12.83□□□□□ -0.36
CXCR4P61073 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.83□□□□□ -0.36
CXCR4P61073 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCR4P61073 CCT8L1P-201ENST00000465400 1674 ntBASIC12.83□□□□□ -0.36
CXCR4P61073 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CXCR4P61073 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.83□□□□□ -0.36
CXCR4P61073 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.83□□□□□ -0.36
CXCR4P61073 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CXCR4P61073 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CXCR4P61073 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCR4P61073 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CXCR4P61073 TUBB2BP1-201ENST00000404155 871 ntBASIC12.82□□□□□ -0.36
CXCR4P61073 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCR4P61073 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms