Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RBP1P09455 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RBP1P09455 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RBP1P09455 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RBP1P09455 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RBP1P09455 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RBP1P09455 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RBP1P09455 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RBP1P09455 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RBP1P09455 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RBP1P09455 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RBP1P09455 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RBP1P09455 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.9□□□□□ -0.18
RBP1P09455 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
RBP1P09455 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RBP1P09455 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.9□□□□□ -0.18
RBP1P09455 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RBP1P09455 AC073862.5-201ENST00000624129 2027 ntBASIC13.9□□□□□ -0.18
RBP1P09455 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RBP1P09455 MARK2P16-201ENST00000605714 1723 ntBASIC13.9□□□□□ -0.18
RBP1P09455 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.9□□□□□ -0.19
RBP1P09455 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.89□□□□□ -0.19
RBP1P09455 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
RBP1P09455 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
RBP1P09455 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RBP1P09455 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.89□□□□□ -0.19
RBP1P09455 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RBP1P09455 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RBP1P09455 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.89□□□□□ -0.19
RBP1P09455 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.89□□□□□ -0.19
RBP1P09455 DLX4-206ENST00000611342 1662 ntBASIC13.89□□□□□ -0.19
RBP1P09455 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 MIR193BHG-211ENST00000641433 5365 ntBASIC13.89□□□□□ -0.19
RBP1P09455 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RBP1P09455 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.89□□□□□ -0.19
RBP1P09455 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.89□□□□□ -0.19
RBP1P09455 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RBP1P09455 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.89□□□□□ -0.19
RBP1P09455 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.89□□□□□ -0.19
RBP1P09455 AC011742.3-201ENST00000439053 820 ntBASIC13.89□□□□□ -0.19
RBP1P09455 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RBP1P09455 HSPB1P2-201ENST00000448722 546 ntBASIC13.89□□□□□ -0.19
RBP1P09455 EIF4HP1-201ENST00000453115 687 ntBASIC13.89□□□□□ -0.19
RBP1P09455 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RBP1P09455 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.89□□□□□ -0.19
RBP1P09455 HLA-J-204ENST00000495278 958 ntBASIC13.89□□□□□ -0.19
RBP1P09455 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.89□□□□□ -0.19
RBP1P09455 AC005225.4-201ENST00000557330 545 ntBASIC13.89□□□□□ -0.19
RBP1P09455 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.89□□□□□ -0.19
RBP1P09455 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.89□□□□□ -0.19
RBP1P09455 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RBP1P09455 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.89□□□□□ -0.19
RBP1P09455 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.89□□□□□ -0.19
RBP1P09455 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RBP1P09455 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RBP1P09455 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RBP1P09455 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RBP1P09455 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RBP1P09455 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RBP1P09455 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RBP1P09455 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.88□□□□□ -0.19
RBP1P09455 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RBP1P09455 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.88□□□□□ -0.19
RBP1P09455 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms