Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.4□□□□□ -0.43
NPIPB4C9JG80 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
NPIPB4C9JG80 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
NPIPB4C9JG80 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.4□□□□□ -0.43
NPIPB4C9JG80 PES1P2-201ENST00000449745 1735 ntBASIC12.4□□□□□ -0.43
NPIPB4C9JG80 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
NPIPB4C9JG80 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 AC002350.2-201ENST00000623894 1828 ntBASIC12.39□□□□□ -0.43
NPIPB4C9JG80 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 AC004241.5-201ENST00000623870 2448 ntBASIC12.39□□□□□ -0.43
NPIPB4C9JG80 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 AL353637.1-201ENST00000451571 732 ntBASIC12.39□□□□□ -0.43
NPIPB4C9JG80 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 KLF17P1-201ENST00000547105 1126 ntBASIC12.39□□□□□ -0.43
NPIPB4C9JG80 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 RCC2P5-201ENST00000492126 1487 ntBASIC12.39□□□□□ -0.43
NPIPB4C9JG80 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.39□□□□□ -0.43
NPIPB4C9JG80 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 AC138761.6-201ENST00000583997 1423 ntBASIC12.38□□□□□ -0.43
NPIPB4C9JG80 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 LINC00638-201ENST00000555578 2518 ntBASIC12.38□□□□□ -0.43
NPIPB4C9JG80 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 FAM86MP-201ENST00000340703 885 ntBASIC12.38□□□□□ -0.43
NPIPB4C9JG80 AC106827.1-201ENST00000366454 431 ntBASIC12.38□□□□□ -0.43
NPIPB4C9JG80 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 AL627231.1-201ENST00000394467 1125 ntBASIC12.38□□□□□ -0.43
NPIPB4C9JG80 TUBB2BP1-201ENST00000404155 871 ntBASIC12.38□□□□□ -0.43
NPIPB4C9JG80 MIR1247-201ENST00000408206 136 ntBASIC12.38□□□□□ -0.43
NPIPB4C9JG80 GPAA1P2-201ENST00000417923 928 ntBASIC12.38□□□□□ -0.43
NPIPB4C9JG80 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 DUTP3-201ENST00000450025 415 ntBASIC12.38□□□□□ -0.43
NPIPB4C9JG80 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 RN7SL788P-201ENST00000460504 316 ntBASIC12.38□□□□□ -0.43
NPIPB4C9JG80 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 MIR4754-201ENST00000582477 89 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms