Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ELOBP2-201ENST00000526184 355 ntBASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 CALM3-206ENST00000594523 540 ntTSL 4 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 AC009779.7-201ENST00000609031 469 ntBASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 AL137028.2-201ENST00000614601 256 ntBASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 MIR941-1-201ENST00000636396 72 ntBASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 KRT18P45-201ENST00000515347 1333 ntBASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
TMEM88BA6NKF7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
TMEM88BA6NKF7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.14
TMEM88BA6NKF7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TMEM88BA6NKF7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 AP001979.1-201ENST00000529222 751 ntBASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 RN7SL5P-201ENST00000581458 321 ntBASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 AC117500.5-201ENST00000623233 527 ntBASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 AL139424.3-202ENST00000641619 917 ntBASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM88BA6NKF7 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 NRADDP-202ENST00000641269 1585 ntBASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 AC007279.1-201ENST00000448547 837 ntBASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 RN7SL111P-201ENST00000468841 285 ntBASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 AC063924.1-201ENST00000546680 673 ntBASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 AC010601.2-201ENST00000623060 774 ntBASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms